RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CNTFRP26992 372 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 RPS20P60866 119 aaKnown RBP10.34□□□□□ -0.75
SHOX2-205ENST00000490689 COX8AP10176 69 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 LINC00310P59036 64 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 LYRM7Q5U5X0 104 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 SLC25A15Q9Y619 301 aa10.34□□□□□ -0.75
SHOX2-205ENST00000490689 C16orf92Q96LL3 132 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 A0A1B0GW15 77 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 FNDC10F2Z333 226 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 P0C879 139 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 HERVK_113P61574 105 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 LYPD2Q6UXB3 125 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 K7EMI3 77 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 K7ERJ3 54 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 DPM2O94777 84 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 C21orf62Q9NYP8 219 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 MUC22E2RYF6 1773 aaPredicted RBP10.33□□□□□ -0.76
SHOX2-205ENST00000490689 IGKCP01834 107 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 PRSS2P07478 247 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 ETDBQ3ZM63 59 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 FAM71F2Q6NXP2 309 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 PRUNE2Q8WUY3 3088 aa10.33□□□□□ -0.76
SHOX2-205ENST00000490689 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 A6NJY4 79 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 TRGV9Q99603 122 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 RBX1P62877 108 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 GDF5OSQ5U4N7 250 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 PCP2Q8IVA1 136 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 C8orf49Q96NF6 230 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 JMJD8Q96S16 334 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 ANKRD39Q53RE8 183 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 ZNF503Q96F45 646 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
SHOX2-205ENST00000490689 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 PLSCR4Q9NRQ2 329 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 FABP5P3A8MUU1 101 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 SH2D1AO60880 128 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 ATP5LO75964 103 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 DLX6P56179 175 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 RHOGP84095 191 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 PATE2Q6UY27 113 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 TIMM23O14925 209 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
SHOX2-205ENST00000490689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
SHOX2-205ENST00000490689 FTH1P19P0C7X4 201 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 CTRLP40313 264 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 AMTNQ6UX39 209 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 TTTY13Q9BZ97 58 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 RAXQ9Y2V3 346 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 LTBP2Q14767 1821 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 TMEM238C9JI98 176 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 GTSF1Q8WW33 167 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 TMEM158Q8WZ71 300 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 FAM167A-AS1Q96KT0 104 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 ZNF747Q9BV97 191 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 SIGLEC8Q9NYZ4 499 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 DKK2Q9UBU2 259 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 TSSC4Q9Y5U2 329 aaPredicted RBP10.3□□□□□ -0.76
SHOX2-205ENST00000490689 TRIOO75962 3097 aa10.3□□□□□ -0.76
SHOX2-205ENST00000490689 E7EUB6 86 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 H3BRM9 83 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 WISP2O76076 250 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 KLF5Q13887 457 aaPredicted RBP10.29□□□□□ -0.76
SHOX2-205ENST00000490689 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 ZNF474Q6S9Z5 364 aaPredicted RBP10.29□□□□□ -0.76
SHOX2-205ENST00000490689 WFDC12Q8WWY7 111 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 FAM120AOSQ5T036 256 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
SHOX2-205ENST00000490689 IGLV2-8P01709 118 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 CSTL1Q9H114 145 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 SIGLEC9Q9Y336 463 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 TRAV40A0A0B4J280 105 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 LINC01560Q8TB33 94 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
SHOX2-205ENST00000490689 C1RLQ9NZP8 487 aa10.29□□□□□ -0.76
SHOX2-205ENST00000490689 IGHV1-8P0DP01 117 aa10.28□□□□□ -0.76
SHOX2-205ENST00000490689 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
SHOX2-205ENST00000490689 DPM3Q9P2X0 92 aa10.28□□□□□ -0.76
SHOX2-205ENST00000490689 K7EP34 96 aa10.28□□□□□ -0.76
SHOX2-205ENST00000490689 ZNF492Q9P255 531 aa10.28□□□□□ -0.76
SHOX2-205ENST00000490689 ATG2AQ2TAZ0 1938 aa10.27□□□□□ -0.76
SHOX2-205ENST00000490689 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.76
SHOX2-205ENST00000490689 C1orf229Q6ZS94 237 aaPredicted RBP10.27□□□□□ -0.76
SHOX2-205ENST00000490689 TMEM75Q8N9X5 138 aa10.27□□□□□ -0.76
SHOX2-205ENST00000490689 UBTD1Q9HAC8 227 aa10.27□□□□□ -0.76
SHOX2-205ENST00000490689 SP9P0CG40 484 aa10.27□□□□□ -0.77
SHOX2-205ENST00000490689 GLMPQ8WWB7 406 aa10.27□□□□□ -0.77
SHOX2-205ENST00000490689 METTL26Q96S19 204 aa10.27□□□□□ -0.77
SHOX2-205ENST00000490689 GFRA4Q9GZZ7 299 aa10.27□□□□□ -0.77
SHOX2-205ENST00000490689 A0A1W2PPM0 123 aa10.27□□□□□ -0.77
SHOX2-205ENST00000490689 NPYP01303 97 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms