RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TRGV4A0A0C4DH28 118 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 TBX15Q96SF7 602 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 PGPEP1LA6NFU8 196 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 SNCGO76070 127 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 WFDC11Q8NEX6 87 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 ZNF502Q8TBZ5 544 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 RNASE7Q9H1E1 156 aaKnown RBP11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 CBLN1P23435 193 aa11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 PACRGQ96M98 296 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF39-205ENST00000490638 ZNF138P52744 262 aa11.46□□□□□ -0.57
ARHGEF39-205ENST00000490638 FXYD7P58549 80 aa11.46□□□□□ -0.57
ARHGEF39-205ENST00000490638 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF39-205ENST00000490638 Q6AWC8 147 aa11.46□□□□□ -0.57
ARHGEF39-205ENST00000490638 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
ARHGEF39-205ENST00000490638 LCN12Q6JVE5 192 aa11.46□□□□□ -0.57
ARHGEF39-205ENST00000490638 FNDC10F2Z333 226 aa11.46□□□□□ -0.58
ARHGEF39-205ENST00000490638 POU2AF1Q16633 256 aa11.46□□□□□ -0.58
ARHGEF39-205ENST00000490638 MST1LQ2TV78 715 aa11.46□□□□□ -0.58
ARHGEF39-205ENST00000490638 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 LMO4P61968 165 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 FOXL1Q12952 345 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 PRO1933Q9H354 126 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 TGIF2-C20orf24A0A0A6YYL0 155 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 Q8TAT8 98 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 TRAV12-3A0A0B4J271 114 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 IL36BQ9NZH7 164 aa11.45□□□□□ -0.58
ARHGEF39-205ENST00000490638 HECTD1Q9ULT8 2610 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 TRAV8-1A0A0A6YYK1 113 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 PPP1R17O96001 155 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 ZNF256Q9Y2P7 627 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 TCRAP04437 139 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 RPL23P62829 140 aaKnown RBP11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 CYTL1Q9NRR1 136 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 TMEM97Q5BJF2 176 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
ARHGEF39-205ENST00000490638 LEPROTL1O95214 131 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 AP5S1Q9NUS5 200 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 PSG3Q16557 428 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 PRELID3AQ96N28 172 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 MIEN1Q9BRT3 115 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 LAMA1P25391 3075 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 H3BVH4 76 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 RIPPLY3P57055 190 aa11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 SRSF4Q08170 494 aaKnown RBP11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 GEMIN7Q9H840 131 aaKnown RBP11.43□□□□□ -0.58
ARHGEF39-205ENST00000490638 NDUFA4O00483 81 aa11.42□□□□□ -0.58
ARHGEF39-205ENST00000490638 LYPD6Q86Y78 171 aa11.42□□□□□ -0.58
ARHGEF39-205ENST00000490638 Q8N7P7 452 aa11.42□□□□□ -0.58
ARHGEF39-205ENST00000490638 NCKAP5O14513 1909 aa11.42□□□□□ -0.58
ARHGEF39-205ENST00000490638 IGLV1-47P01700 117 aa11.42□□□□□ -0.58
ARHGEF39-205ENST00000490638 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
ARHGEF39-205ENST00000490638 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 A0A1B0GUS0 222 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 PAX9P55771 341 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 MCRIP2Q9BUT9 160 aaKnown RBP11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 PLA2G2AP14555 144 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 DEFB136Q30KP8 78 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 LYPD1Q8N2G4 141 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 OR10AG1Q8NH19 301 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 TRGV1A0A0A0MS02 117 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 TCTAP57738 103 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 HSPB9Q9BQS6 159 aa11.41□□□□□ -0.58
ARHGEF39-205ENST00000490638 IGHV7-81A0A0B4J1V7 117 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 CYYR1Q96J86 154 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 MRPL27Q9P0M9 148 aaKnown RBP11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 ARHGAP21Q5T5U3 1957 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 CCL24O00175 119 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 CDSNQ15517 529 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 BCL6BQ8N143 479 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 RCHY1Q96PM5 261 aa11.4□□□□□ -0.58
ARHGEF39-205ENST00000490638 CA1P00915 261 aaPredicted RBP11.4□□□□□ -0.59
ARHGEF39-205ENST00000490638 TMEM101Q96IK0 257 aa11.4□□□□□ -0.59
ARHGEF39-205ENST00000490638 LRP4O75096 1905 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 TRAV1-1A0A0B4J248 108 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 IGLC7A0M8Q6 106 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 INSP01308 110 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 C8orf86Q6ZUL3 223 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 A0A087X0M5 115 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 A0A1B0GX30 115 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 SCGB1C2P0DMR2 95 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms