RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SAMD13Q5VXD3 122 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 KIR2DL5AQ8N109 375 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 KIR2DL5BQ8NHK3 375 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 SAT2Q96F10 170 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 RCHY1Q96PM5 261 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 FUT9Q9Y231 359 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 U3KQK5 164 aa10.56□□□□□ -0.72
SRGAP3-208ENST00000490348 HMSDA8MTL9 139 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 H3BMM0 161 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 EIF3GO75821 320 aaKnown RBP eCLIP10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 PRB4P10163 310 aaPredicted RBP10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 CXCL2P19875 107 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 APOC4P55056 127 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 CD300CQ08708 224 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 NDUFA5Q16718 116 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 STHQ8IWL8 128 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 TCTE3Q8IZS6 198 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 SPATA25Q9BR10 227 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 SAV1Q9H4B6 383 aaPredicted RBP10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
SRGAP3-208ENST00000490348 HLA-DRB4P13762 266 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 RAB2AP61019 212 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 ZNF345Q14585 488 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 OR2G3Q8NGZ4 309 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 ZNF503Q96F45 646 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 ZMAT4Q9H898 229 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 ZNF331Q9NQX6 463 aaPredicted RBP10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 HLA-DRB4X5D2U9 266 aa10.54□□□□□ -0.72
SRGAP3-208ENST00000490348 C4BPBP20851 252 aa10.53□□□□□ -0.72
SRGAP3-208ENST00000490348 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
SRGAP3-208ENST00000490348 LCN15Q6UWW0 184 aa10.53□□□□□ -0.72
SRGAP3-208ENST00000490348 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
SRGAP3-208ENST00000490348 OVOL2Q9BRP0 275 aa10.53□□□□□ -0.72
SRGAP3-208ENST00000490348 PSMG3Q9BT73 122 aaPredicted RBP10.53□□□□□ -0.72
SRGAP3-208ENST00000490348 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.72
SRGAP3-208ENST00000490348 A0A0J9YX75 114 aa10.52□□□□□ -0.72
SRGAP3-208ENST00000490348 NDUFB4O95168 129 aa10.52□□□□□ -0.72
SRGAP3-208ENST00000490348 M6PRP20645 277 aa10.52□□□□□ -0.72
SRGAP3-208ENST00000490348 Q6ZWC4 215 aa10.52□□□□□ -0.72
SRGAP3-208ENST00000490348 RPRMQ9NS64 109 aa10.52□□□□□ -0.72
SRGAP3-208ENST00000490348 BORCS7-ASMTA0A0B4J1R7 106 aa10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 UBE2CO00762 179 aa10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 TAAR5O14804 337 aa10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 CA1P00915 261 aaPredicted RBP10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 ACOT6Q3I5F7 207 aaPredicted RBP10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 RPP25LQ8N5L8 163 aaKnown RBP10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 FXYD5Q96DB9 178 aa10.52□□□□□ -0.73
SRGAP3-208ENST00000490348 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 ZNF705FA8MVS1 300 aaPredicted RBP10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 RGS13O14921 159 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 JTBO76095 146 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 IGKV3-20P01619 116 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 OR10J4P0C629 311 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 RHOBP62745 196 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 PSG3Q16557 428 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 GUK1Q16774 197 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 ZNF738Q8NE65 137 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 OR10G4Q8NGN3 311 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 OR10G9Q8NGN4 311 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 OR10G7Q8NGN6 311 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 LRRC20Q8TCA0 184 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 RNF183Q96D59 192 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
SRGAP3-208ENST00000490348 A8MTW9 85 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 SPP1P10451 314 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 SERF2P84101 59 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 BLNKQ8WV28 456 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 GNPNAT1Q96EK6 184 aaPredicted RBP10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
SRGAP3-208ENST00000490348 A0A0D9SG52 128 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 SPRY2O43597 315 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 OR7C2O60412 319 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 ZNF253O75346 499 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 EBLN2Q6P2I7 272 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 SSX7Q7RTT5 188 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 OR4B1Q8NGF8 309 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 CLUHP3Q96NS8 147 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 CLEC5AQ9NY25 188 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
SRGAP3-208ENST00000490348 BCL2L11O43521 198 aa10.48□□□□□ -0.73
SRGAP3-208ENST00000490348 C1QBP02746 253 aa10.48□□□□□ -0.73
SRGAP3-208ENST00000490348 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
SRGAP3-208ENST00000490348 CNN1P51911 297 aaKnown RBP10.48□□□□□ -0.73
SRGAP3-208ENST00000490348 PDE6HQ13956 83 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms