RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 FHL3Q13643 280 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 C10orf91Q5T1B1 145 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 CCDC28AQ8IWP9 274 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 CYB561D1Q8N8Q1 229 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 RAX2Q96IS3 184 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 LINC00052Q96N35 136 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 SLC50A1Q9BRV3 221 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 Q9H3A6 140 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 AAMDCQ9H7C9 122 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 SMAD5-AS1Q9Y6J3 95 aa10.1□□□□□ -0.79
HLA-DOA-205ENST00000490305 TMEM213A2RRL7 107 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 PGPA6NDG6 321 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 NDUFB4O95168 129 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 CEBPGP53567 150 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 RPUSD4Q96CM3 377 aaKnown RBP10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 CLEC5AQ9NY25 188 aa10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
HLA-DOA-205ENST00000490305 C2CD3Q4AC94 2353 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 H3BTX0 84 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 SLC25A5P05141 298 aaKnown RBP10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 SNRPCP09234 159 aaKnown RBP10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 CBLN1P23435 193 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 AWAT1Q58HT5 328 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 OR9G4Q8NGQ1 327 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 HIST1H2BAQ96A08 127 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 DUX3Q96PT4 197 aa10.08□□□□□ -0.8
HLA-DOA-205ENST00000490305 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 ADCYAP1P18509 176 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 KRTAP10-3P60369 221 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 NSUN5P1Q3KNT7 163 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 FAM90A2PQ658T7 463 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 C17orf77Q96MU5 243 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 PARLQ9H300 379 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 EPDR1Q9UM22 224 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 PRELID1Q9Y255 219 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 NF1P21359 2839 aa10.07□□□□□ -0.8
HLA-DOA-205ENST00000490305 ZNF727A8MUV8 499 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 PEX7O00628 323 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 APOC3P02656 99 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 S100A9P06702 114 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 FOLR2P14207 255 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 CSN1S1P47710 185 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 HIST2H2BDQ6DRA6 164 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 TCF24Q7RTU0 167 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 SVBPQ8N300 66 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 NIPSNAP3BQ9BS92 247 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 ATG101Q9BSB4 218 aa10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 ZNF331Q9NQX6 463 aaPredicted RBP10.06□□□□□ -0.8
HLA-DOA-205ENST00000490305 SERTM2A0A1B0GWG4 89 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 K7EQM0 130 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 SLC17A3O00476 420 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 OVOL1O14753 267 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 AKR1C3P42330 323 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 RPL11P62913 178 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 ZNF674Q2M3X9 581 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 EXOC3-AS1Q8N2X6 119 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 MRPL53Q96EL3 112 aaKnown RBP10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 CITED1Q99966 193 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 SMIM7Q9BQ49 75 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
HLA-DOA-205ENST00000490305 TCRAP04437 139 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 CSN3P07498 182 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 TAS2R60P59551 318 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 NAT8Q9UHE5 227 aa10.04□□□□□ -0.8
HLA-DOA-205ENST00000490305 SNAPINO95295 136 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 EDN2P20800 178 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 ID1P41134 155 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 GNG5P63218 68 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 PAFAH1B2P68402 229 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 PNRC1Q12796 327 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 KRTAP24-1Q3LI83 254 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 TVP23CQ96ET8 276 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 FMC1Q96HJ9 113 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 MLXQ9UH92 298 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
HLA-DOA-205ENST00000490305 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 C9JCJ5 164 aa10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 ISLRO14498 428 aa10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 PF4P02776 101 aa10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 RPL35P42766 123 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 UBE2G1P62253 170 aa10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 TMEM183BQ1AE95 376 aa10.02□□□□□ -0.81
HLA-DOA-205ENST00000490305 PRIMA1Q86XR5 153 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms