RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 FAM3DQ96BQ1 224 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TM4SF18Q96CE8 201 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 C10orf35Q96D05 121 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 IP6K3Q96PC2 410 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 DERL3Q96Q80 235 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TBX5Q99593 518 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 LPAR5Q9H1C0 372 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 UBE2ZQ9H832 354 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 BCL2L10Q9HD36 194 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 CMC2Q9NRP2 79 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 RPRMQ9NS64 109 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ERG28Q9UKR5 140 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 BOKQ9UMX3 212 aaPredicted RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 PSG8Q9UQ74 426 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 FUT9Q9Y231 359 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 POLDIP2Q9Y2S7 368 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 TIMM9Q9Y5J7 89 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 SPCS1Q9Y6A9 102 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 PXMP4Q9Y6I8 212 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 A0A0C4DFX4 3053 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 PTPRFP10586 1907 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 MYLKQ15746 1914 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 ALPK3Q96L96 1907 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 PLXND1Q9Y4D7 1925 aa1.46□□□□□ -2.18
HMGN1-218ENST00000490032 DDX60LQ5H9U9 1706 aaKnown RBP1.46□□□□□ -2.18
HMGN1-218ENST00000490032 PTPRZ1P23471 2315 aaPredicted RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 DSPPQ9NZW4 1301 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TNRC6AQ8NDV7 1962 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 BDP1A6H8Y1 2624 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LAMB2P55268 1798 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 MAST2Q6P0Q8 1798 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 IGKV2-24A0A0C4DH68 120 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CXorf51AA0A1B0GTR3 108 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CTXND1A0A1B0GTU2 59 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 A0A1B0GX51 115 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 NCBP2LA6PVI3 153 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 FABP5P3A8MUU1 101 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 H3BMG7 143 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CRXO43186 299 aaPredicted RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ENSAO43768 121 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 PITX3O75364 302 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 HYPMO75409 117 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ATP5LO75964 103 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR2J3O76001 311 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CST7O76096 145 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 DPM2O94777 84 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LEPROTL1O95214 131 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TSPAN13O95857 204 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CXorf1O96002 111 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CTSDP07339 412 aaPredicted RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 PFN1P07737 140 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 SRP19P09132 144 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 SCTP09683 121 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR4A8P0C604 315 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 IGLC1P0CG04 106 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 BCL2P10415 239 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LIPCP11150 499 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 IL9P15248 144 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS3P17931 250 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ORM2P19652 201 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 HRH1P35367 487 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OPRK1P41145 380 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CA7P43166 264 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS7P47929 136 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 GZMMP51124 257 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 UBE2G1P62253 170 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ADIGQ0VDE8 80 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 KLRD1Q13241 179 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TBC1D28Q2M2D7 210 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 FAM78AQ5JUQ0 283 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ACTL10Q5JWF8 245 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LINC01545Q5VT33 79 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TEX36Q5VZQ5 186 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM42Q69YG0 159 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LAIR2Q6ISS4 152 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 Q6Q795 121 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LCN15Q6UWW0 184 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 UNQ9165/PRO28630Q6UXU0 137 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ASCL4Q6XD76 172 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM91Q6ZNR0 172 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 FOXI2Q6ZQN5 318 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CYP2G1PQ6ZSU1 146 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ASCL5Q7RTU5 278 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 SCD5Q86SK9 330 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TRAPPC6BQ86SZ2 158 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM25Q86YD3 366 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 DEFB106AQ8N104 65 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR5AS1Q8N127 324 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 CA13Q8N1Q1 262 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 UMODL1-AS1Q8N2C9 162 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR11H6Q8NGC7 330 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR1L1Q8NH94 360 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 C18orf32Q8TCD1 76 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 PPDPFLQ8WWR9 84 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 NAT6Q93015 286 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 DNAJC30Q96LL9 226 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR4C12Q96R67 309 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 GPX7Q96SL4 187 aaPredicted RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 GPR21Q99679 349 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 FAM103A1Q9BTL3 118 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms