RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SSX7Q7RTT5 188 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 OR51G1Q8NGK1 321 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 RXFP4Q8TDU9 374 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM190Q8WZ59 177 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 RNF125Q96EQ8 232 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 TVP23CQ96ET8 276 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 TM2D3Q9BRN9 247 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 MRPL32Q9BYC8 188 aaKnown RBP7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM213A2RRL7 107 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 F6UZH7 168 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 M0R036 132 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 IL4P05112 153 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 MEF2BQ02080 365 aaPredicted RBP7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 RELQ04864 619 aaPredicted RBP7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF726P1Q15940 193 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 GUCA2BQ16661 112 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 SPATA31B1PQ5VZV4 182 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 PQLC2Q6ZP29 291 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 Q8WTZ3 238 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 GATAD1Q8WUU5 269 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 RARRES2Q99969 163 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM167BQ9NRX6 74 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 UFC1Q9Y3C8 167 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 U3KQE9 123 aa7.93□□□□□ -1.14
SCAMP4-208ENST00000489554 TENM3Q9P273 2699 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 HUWE1Q7Z6Z7 4374 aaKnown RBP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 A0A087WWC5 75 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 ELOA3CA0A087WX78 387 aaPredicted RBP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF785A8K8V0 405 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 C3orf84H3BNL1 204 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 HMGB3O15347 200 aaKnown RBP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 EIF3GO75821 320 aaKnown RBP eCLIP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 SCO1O75880 301 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 APOHP02749 345 aaPredicted RBP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 OR5G3P0C626 314 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 STAG3L2P0CL84 134 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 STAG3L3P0CL85 134 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 S100A7P31151 101 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 FGF8P55075 233 aaPredicted RBP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 CD81P60033 236 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 LYZP61626 148 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 STXBP6Q8NFX7 210 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 UHRF2Q96PU4 802 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 SLC25A22Q9H936 323 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 SEPSECSQ9HD40 501 aaKnown RBP7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 RPS10P5Q9NQ39 176 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 DOK5Q9P104 306 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
SCAMP4-208ENST00000489554 STAB2Q8WWQ8 2551 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 C9JQL5 133 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 H3BRN7 92 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 DNASE2O00115 360 aaPredicted RBP7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 TSPAN4O14817 238 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF207O43670 478 aaKnown RBP7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 C8orf88P0DMB2 117 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 ORM2P19652 201 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 CRYBB3P26998 211 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 TM4SF20Q53R12 229 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 IQCF2Q8IXL9 164 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 C15orf54Q8N8G6 183 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 OR1B1Q8NGR6 318 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 FAM167A-AS1Q96KT0 104 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 C17orf77Q96MU5 243 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 SPATA25Q9BR10 227 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 DNAJC4Q9NNZ3 241 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 MLXQ9UH92 298 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 FUT9Q9Y231 359 aa7.91□□□□□ -1.14
SCAMP4-208ENST00000489554 TRAV25A0A0B4J276 109 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF727A8MUV8 499 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 H3BQ15 152 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 K7EMT4 169 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 HYPMO75409 117 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 CD7P09564 240 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 ATRAIDQ6UW56 229 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 MIR17HGQ75NE6 70 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM61Q8N0U2 210 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 CYB561D1Q8N8Q1 229 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 RPUSD4Q96CM3 377 aaKnown RBP7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF503Q96F45 646 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 SHANK2-AS3Q9BTD1 123 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 SLC25A39Q9BZJ4 359 aaPredicted RBP7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 CTDSP1Q9GZU7 261 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 DAZ1Q9NQZ3 744 aaKnown RBP7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM242Q9NWH2 141 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 NAT8Q9UHE5 227 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 HIGD1AQ9Y241 93 aa7.9□□□□□ -1.14
SCAMP4-208ENST00000489554 TRAV5A0A0B4J249 113 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 IGHV7-4-1A0A0J9YVY3 117 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 C11orf94C9JXX5 98 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 BUB3O43684 328 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 COX7A2P2O60397 106 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 CEBPGP53567 150 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 TMEM241Q24JQ0 296 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 FAM78BQ5VT40 261 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 C10orf113Q5VZT2 155 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms