RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 EIF3GO75821 320 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 IGLC2P0DOY2 106 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 PYYP10082 97 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 FAM78BQ5VT40 261 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 SAMD13Q5VXD3 122 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 S100A7AQ86SG5 101 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 BPIFA4PQ86YQ2 179 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 ZNF709Q8N972 641 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 LRRC20Q8TCA0 184 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 GATAD1Q8WUU5 269 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 RARRES2Q99969 163 aa8.93□□□□□ -0.98
SMARCD3-213ENST00000489503 FXYD6-FXYD2A0A087WZ82 144 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 G3V3Q6 166 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 C3orf84H3BNL1 204 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 SMLR1H3BR10 107 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 FFAR4Q5NUL3 377 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 CASC10Q5T4H9 136 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 EBLN2Q6P2I7 272 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 LCN15Q6UWW0 184 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 OR2T35Q8NGX2 323 aa8.92□□□□□ -0.98
SMARCD3-213ENST00000489503 ZNF705FA8MVS1 300 aaPredicted RBP8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 IFNA5P01569 189 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 CNN1P51911 297 aaKnown RBP8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 HIST1H1AQ02539 215 aaPredicted RBP8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 PSG3Q16557 428 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 CSNK1G2-AS1Q8NCQ2 148 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 SCGB1C1Q8TD33 95 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 SLC25A2Q9BXI2 301 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 MFFQ9GZY8 342 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 ZNF331Q9NQX6 463 aaPredicted RBP8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 KCNIP2Q9NS61 270 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 ZNF586Q9NXT0 402 aa8.91□□□□□ -0.98
SMARCD3-213ENST00000489503 KMT2CQ8NEZ4 4911 aaKnown RBP8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 IGHV4-28A0A0C4DH34 117 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 RNF222A6NCQ9 220 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 PRAC2D3DTV9 90 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 C17orf112F2Z3M2 114 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 IL17DQ8TAD2 202 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 RPUSD4Q96CM3 377 aaKnown RBP8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 FAM167A-AS1Q96KT0 104 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 AQP10Q96PS8 301 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 SLC50A1Q9BRV3 221 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 HRH4Q9H3N8 390 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 X6R8D5 127 aa8.9□□□□□ -0.98
SMARCD3-213ENST00000489503 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.99
SMARCD3-213ENST00000489503 IGHV3OR16-12A0A075B7B8 117 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 M0R2Z0 102 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 CXCL2P19875 107 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 RAB2AP61019 212 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 NUTF2P61970 127 aaKnown RBP8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 PSG9Q00887 426 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 Q8NAQ8 132 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 OR8A1Q8NGG7 326 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 BLNKQ8WV28 456 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 SAT2Q96F10 170 aaPredicted RBP8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
SMARCD3-213ENST00000489503 A8MTW9 85 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 ZNF705EA8MWA4 302 aaPredicted RBP8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 M0R3E3 92 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 NDUFB4O95168 129 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 OR10J4P0C629 311 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 RBMY1A1P0DJD3 496 aaKnown RBP8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 RBMY1CP0DJD4 496 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 RBMY1FQ15415 496 aaKnown RBP8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 TMEM41BQ5BJD5 291 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 BAP18Q8IXM2 172 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 ASB13Q8WXK3 278 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 C1QTNF4Q9BXJ3 329 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 PARD6GQ9BYG4 376 aaPredicted RBP8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 TMEM14CQ9P0S9 112 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 TNFSF18Q9UNG2 199 aa8.88□□□□□ -0.99
SMARCD3-213ENST00000489503 TRBV19A0A075B6N1 114 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 CXorf65A6NEN9 183 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 HIST1H1EP10412 219 aaKnown RBP8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 NANOS2P60321 138 aaKnown RBP8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 RHOBP62745 196 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 EXOC3-AS1Q8N2X6 119 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 ZNF503Q96F45 646 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 PHYHIPLQ96FC7 376 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 CLUHP3Q96NS8 147 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 MRPL32Q9BYC8 188 aaKnown RBP8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 C11orf68Q9H3H3 251 aaKnown RBP8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 TENM2Q9NT68 2774 aa8.87□□□□□ -0.99
SMARCD3-213ENST00000489503 TRAV12-2A0A075B6T6 113 aa8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 BOLA2-SMG1P6H3BVE0 249 aa8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 ARPC5O15511 151 aa8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 OR7C2O60412 319 aa8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 ATP6V0CP27449 155 aa8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 GUK1Q16774 197 aa8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 RPL7L1Q6DKI1 246 aaKnown RBP8.86□□□□□ -0.99
SMARCD3-213ENST00000489503 FAM122CQ6P4D5 195 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms