RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ATRAIDQ6UW56 229 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 MOB3BQ86TA1 216 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 IQCF2Q8IXL9 164 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 TMEM167AQ8TBQ9 72 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 RXFP4Q8TDU9 374 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 RPEQ96AT9 228 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 NIPSNAP3BQ9BS92 247 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 SCRT1Q9BWW7 348 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 RPS10P5Q9NQ39 176 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 SMCO4Q9NRQ5 59 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 VAX2Q9UIW0 290 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 RFNGQ9Y644 331 aa5.35□□□□□ -1.55
EXOSC3-206ENST00000489414 DEFB131BA0A096LNP1 70 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 TEX50A0A1B0GTY4 177 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 G3V318 75 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 BUB1B-PAK6H3BSN5 160 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 DNASE2O00115 360 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 RRHO14718 337 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 NUPL2O15504 423 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 IGKV1D-33P01593 117 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 IGKV1-33P01594 117 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 IL6RP08887 468 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 MAS1LP35410 378 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 NPBWR1P48145 328 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 CCL20P78556 96 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 C2orf83Q53S99 150 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 FAM122CQ6P4D5 195 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 MMD2Q8IY49 270 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 TEX45Q8NA69 505 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 CACNG8Q8WXS5 425 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 SLC35E1Q96K37 410 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 RNF5Q99942 180 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 SLC25A22Q9H936 323 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 ZNF355PQ9NSJ1 428 aa5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 PUS1Q9Y606 427 aaKnown RBP eCLIP5.34□□□□□ -1.55
EXOSC3-206ENST00000489414 IGHV1-3A0A0C4DH29 117 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 FAM74A7A6NL05 159 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 NCBP2LA6PVI3 153 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 SRRM4A7MD48 611 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 B4DEV8 164 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 C9JQL5 133 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 NDUFS6O75380 124 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 IGHV3-11P01762 117 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 RPL29P47914 159 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 FGF8P55075 233 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 SYNJ2BPP57105 145 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 FAM3BP58499 235 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 B2MP61769 119 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 RHOBP62745 196 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 PNRC1Q12796 327 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 PLGLAQ15195 96 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 ZNF726P1Q15940 193 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 FAM74A3Q4VXF1 159 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 ETFRF1Q6IPR1 90 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 TMEM88Q6PEY1 159 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 RAB24Q969Q5 203 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 TVP23CQ96ET8 276 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 TXNDC17Q9BRA2 123 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 VSIRQ9H7M9 311 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 NDUFA4L2Q9NRX3 87 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 PRELID1Q9Y255 219 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 PXMP4Q9Y6I8 212 aa5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-206ENST00000489414 C7orf77A4D0Y5 90 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 PRSS46E5RG02 174 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 TMEM250H0YL14 139 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 H3BQ15 152 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 CORTO00230 105 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 CXorf1O96002 111 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 GPX4P36969 197 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 RPL27AP46776 148 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 MEF2BQ02080 365 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 TNXAQ16473 311 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 TMEM144Q7Z5S9 345 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 CBLN2Q8IUK8 224 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 C15orf54Q8N8G6 183 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 CYB561D1Q8N8Q1 229 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 OR11H2Q8NH07 326 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 RNASEH2CQ8TDP1 164 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 RNF2Q99496 336 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 TMEM70Q9BUB7 260 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 ZNF430Q9H8G1 570 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 MLXQ9UH92 298 aa5.32□□□□□ -1.56
EXOSC3-206ENST00000489414 IGHV3-72A0A0B4J1Y9 119 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 ZNF727A8MUV8 499 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 F6UZH7 168 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 PDE6DO43924 150 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 IGLV2-23P01705 113 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 RNASE2P10153 161 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 ADMP35318 185 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 TAS2R45P59539 299 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 EBI3Q14213 229 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 PSG5Q15238 335 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 PRSS8Q16651 343 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 BSXQ3C1V8 233 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 MIC13Q5XKP0 118 aa5.31□□□□□ -1.56
EXOSC3-206ENST00000489414 PPP1R27Q86WC6 154 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms