RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 HELTA6NFD8 242 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 ZNF727A8MUV8 499 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 NDUFB4O95168 129 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 F8P00451 2351 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 AKR1C3P42330 323 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 SLURP1P55000 103 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 PSG9Q00887 426 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 FAM74A3Q4VXF1 159 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 C10orf91Q5T1B1 145 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 FAM90A2PQ658T7 463 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 CCDC28AQ8IWP9 274 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.65□□□□□ -1.18
USP11-211ENST00000489111 C5orf17Q8NAS9 161 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 GLMPQ8WWB7 406 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 RHPN1-AS1Q9BWJ2 59 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 PARLQ9H300 379 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 SMPXQ9UHP9 88 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 RPH3ALQ9UNE2 315 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
USP11-211ENST00000489111 TMEM213A2RRL7 107 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 M0R036 132 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 SLC17A3O00476 420 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 PEX7O00628 323 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 ZNF253O75346 499 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 SNAPINO95295 136 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 CSN1S1P47710 185 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 CNN1P51911 297 aaKnown RBP7.64□□□□□ -1.19
USP11-211ENST00000489111 RPL11P62913 178 aaKnown RBP7.64□□□□□ -1.19
USP11-211ENST00000489111 FOXL1Q12952 345 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 KLF5Q13887 457 aaPredicted RBP7.64□□□□□ -1.19
USP11-211ENST00000489111 HIST2H2BDQ6DRA6 164 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 HIST1H2BAQ96A08 127 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 C17orf77Q96MU5 243 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 DUX3Q96PT4 197 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 SLC50A1Q9BRV3 221 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 PEMTQ9UBM1 199 aa7.64□□□□□ -1.19
USP11-211ENST00000489111 CCL24O00175 119 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 CHEK1O14757 476 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 MYCNOSP40205 109 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 GNG5P63218 68 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 GUCA2BQ16661 112 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 NSUN5P1Q3KNT7 163 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 TVP23CQ96ET8 276 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 RAX2Q96IS3 184 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 ATG101Q9BSB4 218 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 DERL1Q9BUN8 251 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 EPDR1Q9UM22 224 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 SMAD5-AS1Q9Y6J3 95 aa7.63□□□□□ -1.19
USP11-211ENST00000489111 C2orf70A6NJV1 201 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 K7EQM0 130 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 RPL35P42766 123 aaKnown RBP7.62□□□□□ -1.19
USP11-211ENST00000489111 UBE2G1P62253 170 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 PNRC1Q12796 327 aaPredicted RBP7.62□□□□□ -1.19
USP11-211ENST00000489111 FHL3Q13643 280 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 SAMD13Q5VXD3 122 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 TCF24Q7RTU0 167 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 NDUFA11Q86Y39 141 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 OR9G4Q8NGQ1 327 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 C2CD4CQ8TF44 421 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 C16orf92Q96LL3 132 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
USP11-211ENST00000489111 ZNF331Q9NQX6 463 aaPredicted RBP7.62□□□□□ -1.19
USP11-211ENST00000489111 TCRAP04437 139 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 S100A9P06702 114 aaKnown RBP7.61□□□□□ -1.19
USP11-211ENST00000489111 FOLR2P14207 255 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 CBLN1P23435 193 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 GNG4P50150 75 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 ADIRFQ15847 76 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 AWAT1Q58HT5 328 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 CENPWQ5EE01 88 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 GOLT1AQ6ZVE7 132 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 CLRN3Q8NCR9 226 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 DYNLRB2Q8TF09 96 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 DLX4Q92988 240 aaPredicted RBP7.61□□□□□ -1.19
USP11-211ENST00000489111 CLEC5AQ9NY25 188 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 PRELID1Q9Y255 219 aa7.61□□□□□ -1.19
USP11-211ENST00000489111 IGKV3-7A0A075B6H7 116 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 SERTM2A0A1B0GWG4 89 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 C9JCJ5 164 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 M0R3E3 92 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 EDN2P20800 178 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 TAS2R60P59551 318 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 RHEBQ15382 184 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 SDF2L1Q9HCN8 221 aa7.6□□□□□ -1.19
USP11-211ENST00000489111 TRAV34A0A0B4J273 112 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 ADARB2-AS1A8MUL3 147 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 DNASE2O00115 360 aaPredicted RBP7.59□□□□□ -1.19
USP11-211ENST00000489111 ISLRO14498 428 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 OVOL1O14753 267 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 PF4P02776 101 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 ID1P41134 155 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 KRTAP10-3P60369 221 aa7.59□□□□□ -1.19
USP11-211ENST00000489111 TMEM183BQ1AE95 376 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms