RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PMS2P5A8MQ11 134 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 SNRPGP15A8MWD9 76 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 IGLL5B9A064 214 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 H3BMM0 161 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 SOCS3O14543 225 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 PLA2G10O15496 165 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 MED6O75586 246 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 METTL15P1P0C7V9 234 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 SPP1P10451 314 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 SLC25A6P12236 298 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 HLA-DMBP28068 263 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 NKX2-1P43699 371 aaPredicted RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 PAX9P55771 341 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 FGL1Q08830 312 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 ARL16Q0P5N6 197 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 MORN3Q6PF18 240 aaPredicted RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 OR8I2Q8N0Y5 310 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 RNF182Q8N6D2 247 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 THAP8Q8NA92 274 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 OR4D5Q8NGN0 318 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 UHRF2Q96PU4 802 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 TRGV9Q99603 122 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 SEC22CQ9BRL7 303 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 RSG1Q9BU20 258 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 C20orf85Q9H1P6 137 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 C11orf68Q9H3H3 251 aaKnown RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 GSKIPQ9P0R6 139 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 TBC1D24Q9ULP9 559 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 RCL1Q9Y2P8 373 aaKnown RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 KLK5Q9Y337 293 aaPredicted RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 STRAPQ9Y3F4 350 aaKnown RBP4.24□□□□□ -1.73
CDHR3-213ENST00000488386 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
CDHR3-213ENST00000488386 TRAV8-2A0A0B4J237 113 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 NAP1L6A6NFF2 107 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 ZNF98A6NK75 572 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 ZNF705EA8MWA4 302 aaPredicted RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 FAM25EA8MYX2 175 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 H3BTX0 84 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 HLA-DRB4P13762 266 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 AP2S1P53680 142 aaPredicted RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 SLC38A11Q08AI6 406 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 IAH1Q2TAA2 248 aaPredicted RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 C12orf74Q32Q52 190 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 CYP2G1PQ6ZSU1 146 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 ZBTB8BQ8NAP8 495 aaPredicted RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 COQ8AQ8NI60 647 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 CIB3Q96Q77 187 aaPredicted RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 SAV1Q9H4B6 383 aaPredicted RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 LSM5Q9Y4Y9 91 aaKnown RBP4.23□□□□□ -1.73
CDHR3-213ENST00000488386 HLA-DRB4X5D2U9 266 aa4.23□□□□□ -1.73
CDHR3-213ENST00000488386 CENPXA8MT69 81 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 LYRM1O43325 122 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 IFNA21P01568 189 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 IL5P05113 134 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 MIFP14174 115 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 RPP30P78346 268 aaKnown RBP4.22□□□□□ -1.73
CDHR3-213ENST00000488386 FAM78BQ5VT40 261 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 PATE2Q6UY27 113 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 PRR26Q8N8Z3 221 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 ZNF709Q8N972 641 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 NEXN-AS1Q8NBZ9 246 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 BPIFCQ8NFQ6 507 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 ZNF479Q96JC4 524 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 TMEM147Q9BVK8 224 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 CACFD1Q9UGQ2 172 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 APLNQ9ULZ1 77 aa4.22□□□□□ -1.73
CDHR3-213ENST00000488386 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 A0A0J9YX75 114 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 C7orf66A4D0T2 115 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 FAM24AA6NFZ4 105 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 H3BRN7 92 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 K7EPK0 472 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 M0R2Z0 102 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 CST7O76096 145 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 TCRBP04435 133 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 FABP1P07148 127 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 OR5G3P0C626 314 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 LINC00869P0C866 280 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 HTN3P15516 51 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 ID1P41134 155 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 GALR1P47211 349 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 PSMB3P49720 205 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 BCAP31P51572 246 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 ATP5IP56385 69 aaPredicted RBP4.21□□□□□ -1.74
CDHR3-213ENST00000488386 PSG9Q00887 426 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 TMEM14EPQ6UXP3 125 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 TMEM144Q7Z5S9 345 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 BAP18Q8IXM2 172 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 C1orf158Q8N1D5 194 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 MITD1Q8WV92 249 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 TMEM18Q96B42 140 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 SMIM8Q96KF7 97 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 C7orf50Q9BRJ6 194 aaKnown RBP4.21□□□□□ -1.74
CDHR3-213ENST00000488386 PARD6GQ9BYG4 376 aaPredicted RBP4.21□□□□□ -1.74
CDHR3-213ENST00000488386 SLC25A39Q9BZJ4 359 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms