RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 YTHDF2Q9Y5A9 579 aaKnown RBP9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 A0A1W2PS18 150 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 K7EIL1 84 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 SNAPINO95295 136 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 CRYBB3P26998 211 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 BMI1P35226 326 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 CDX1P47902 265 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 RPEL1Q2QD12 228 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 OR8I2Q8N0Y5 310 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 BLNKQ8WV28 456 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 GRAMD2BQ96HH9 432 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 ZNF414Q96IQ9 312 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 OR5B12Q96R08 314 aa9.22□□□□□ -0.93
HLA-DOB-209ENST00000488325 DNAH1Q9P2D7 4330 aa9.21□□□□□ -0.93
HLA-DOB-209ENST00000488325 C3orf84H3BNL1 204 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 K7EMT4 169 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 ATF4P18848 351 aaPredicted RBP9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 GALR1P47211 349 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 PDE6HQ13956 83 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 KHDC1LQ5JSQ8 128 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 FAM90A2PQ658T7 463 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 CCDC28AQ8IWP9 274 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 LYPD1Q8N2G4 141 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 C11orf52Q96A22 123 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 RPUSD4Q96CM3 377 aaKnown RBP9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 NIPSNAP3BQ9BS92 247 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 ELOVL1Q9BW60 279 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 OTORQ9NRC9 128 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 U3KQE9 123 aa9.21□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF320A2RRD8 509 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF727A8MUV8 499 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 BUB3O43684 328 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF253O75346 499 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGLC2P0DOY2 106 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 MEOX2P50222 304 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 DEFB121Q5J5C9 76 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 WIPF2Q8TF74 440 aaPredicted RBP9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 C4orf3Q8WVX3 66 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 SMIM7Q9BQ49 75 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 PARLQ9H300 379 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
HLA-DOB-209ENST00000488325 PCLOQ9Y6V0 5065 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 A0A087X0K7 114 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF785A8K8V0 405 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 GGTLC3B5MD39 225 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF207O43670 478 aaKnown RBP9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 AKR1C3P42330 323 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 RANP62826 216 aaKnown RBP9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 PNRC1Q12796 327 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 ZNF674Q2M3X9 581 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 DPF1Q92782 380 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 TVP23CQ96ET8 276 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 Q9H3A6 140 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV4OR15-8A0A075B7B6 117 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 A0A087WW49 117 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV7-4-1A0A0J9YVY3 117 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 PGPA6NDG6 321 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 LINC01619G3V211 115 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 H3BQ15 152 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 M0R036 132 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 LGALS9O00182 355 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 SLC25A5P05141 298 aaKnown RBP9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 PSG9Q00887 426 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 GUCA2BQ16661 112 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 C16orf54Q6UWD8 224 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 UNQ9165/PRO28630Q6UXU0 137 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 C5orf17Q8NAS9 161 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 CMTM2Q8TAZ6 248 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 NAT8Q9UHE5 227 aa9.18□□□□□ -0.94
HLA-DOB-209ENST00000488325 STAB2Q8WWQ8 2551 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 LCE6AA0A183 80 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 PEX7O00628 323 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 NDUFB4O95168 129 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 S100A9P06702 114 aaKnown RBP9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 MYCNOSP40205 109 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 CNN1P51911 297 aaKnown RBP9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 TMEM241Q24JQ0 296 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 CLRN3Q8NCR9 226 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 SLC50A1Q9BRV3 221 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 EPDR1Q9UM22 224 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 HERC2O95714 4834 aa9.17□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 HELTA6NFD8 242 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 A8MWP6 167 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 H3BTX0 84 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 SNRPCP09234 159 aaKnown RBP9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 HOXD3P31249 432 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms