RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 C7orf66A4D0T2 115 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 C7orf77A4D0Y5 90 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 A8MUN3 132 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 C4orf51C9J302 202 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 M0R378 163 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 LYRM1O43325 122 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 NDUFC1O43677 76 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 ZNF73O43830 326 aaPredicted RBP2.84□□□□□ -1.95
VPS8-224ENST00000488255 UBL3O95164 117 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 LTAP01374 205 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 ACYP1P07311 99 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 TRGC1P0CF51 173 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 COX6A1P12074 109 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 PIPP12273 146 aaPredicted RBP2.84□□□□□ -1.95
VPS8-224ENST00000488255 CBLN1P23435 193 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 DYNLT3P51808 116 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 UBE2L3P68036 154 aaKnown RBP2.84□□□□□ -1.95
VPS8-224ENST00000488255 ZNF345Q14585 488 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 ASB16-AS1Q495Z4 193 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 FAM19A3Q7Z5A8 133 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 RPP25LQ8N5L8 163 aaKnown RBP2.84□□□□□ -1.95
VPS8-224ENST00000488255 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 SLC25A29Q8N8R3 303 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 OR5C1Q8NGR4 320 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 CAMK2N2Q96S95 79 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 CHAC1Q9BUX1 264 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 PLA2G2FQ9BZM2 168 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 NHP2Q9NX24 153 aaKnown RBP2.84□□□□□ -1.95
VPS8-224ENST00000488255 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 COQ4Q9Y3A0 265 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 FANCMQ8IYD8 2048 aa2.84□□□□□ -1.95
VPS8-224ENST00000488255 PHLPP1O60346 1717 aa2.84□□□□□ -1.96
VPS8-224ENST00000488255 COL1A2P08123 1366 aa2.84□□□□□ -1.96
VPS8-224ENST00000488255 SIPA1L1O43166 1804 aa2.84□□□□□ -1.96
VPS8-224ENST00000488255 PLEKHH2Q8IVE3 1493 aa2.84□□□□□ -1.96
VPS8-224ENST00000488255 TRBV24-1A0A075B6N3 115 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 IGHV3-74A0A0B4J1X5 117 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 LOC107986453A0A1B0GWG9 222 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 TMEM235A6NFC5 223 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 C9JCJ5 164 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 GNGT2O14610 69 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 FSTL3O95633 263 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 TCL1BO95988 128 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 CD3DP04234 171 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 ZNF688P0C7X2 276 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 ZNF286BP0CG31 522 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 SAA1P0DJI8 122 aaPredicted RBP2.83□□□□□ -1.96
VPS8-224ENST00000488255 NMUP48645 174 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 UBE2AP49459 152 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 HINT1P49773 126 aaPredicted RBP2.83□□□□□ -1.96
VPS8-224ENST00000488255 INSL3P51460 131 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 ZNF138P52744 262 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 DIAPH2-AS1Q14236 149 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 SPATA45Q537H7 98 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 HMGN2P46Q86SG4 172 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 SAXO1Q8IYX7 474 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 OR2T35Q8NGX2 323 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 SHANK2-AS3Q9BTD1 123 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 NPCDR1Q9BY65 106 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 NDUFB11Q9NX14 153 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 IL36BQ9NZH7 164 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 ZNF638Q14966 1978 aaKnown RBP2.83□□□□□ -1.96
VPS8-224ENST00000488255 PXDNQ92626 1479 aa2.83□□□□□ -1.96
VPS8-224ENST00000488255 ABCA9Q8IUA7 1624 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 CHD2O14647 1828 aaKnown RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 FOCADQ5VW36 1801 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 BRCA1P38398 1863 aaKnown RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 NUP210Q8TEM1 1887 aaPredicted RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 IGHV3OR15-7A0A075B7D8 119 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 A0A0J9YW62 118 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 A0A1W2PPM0 123 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 ZNF860A6NHJ4 632 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 TMEM256-PLSCR3K7ERE1 68 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 SDCBPO00560 298 aaPredicted RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 PLA2G10O15496 165 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 IGKV2D-28P01615 120 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 SLC25A6P12236 298 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 PTHLHP12272 177 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 FXYD7P58549 80 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 PCBD1P61457 104 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 RPL30P62888 115 aaKnown RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 PDPNQ86YL7 162 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 AMN1Q8IY45 258 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 MYOZ3Q8TDC0 251 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 SPTSSAQ969W0 71 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 SCGB3A1Q96QR1 104 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 NAA38Q9BRA0 125 aaKnown RBP2.82□□□□□ -1.96
VPS8-224ENST00000488255 LINC00467Q9BRT7 94 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 EPDR1Q9UM22 224 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 RNF11Q9Y3C5 154 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 EFCAB5A4FU69 1503 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 ABCC1P33527 1531 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 SETBP1Q9Y6X0 1596 aa2.82□□□□□ -1.96
VPS8-224ENST00000488255 DNMT1P26358 1616 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms