RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 LYSMD1Q96S90 227 aa0.36□□□□□ -2.35
R3HDM1-219ENST00000488035 OR2J1Q9GZK6 312 aa0.36□□□□□ -2.35
R3HDM1-219ENST00000488035 CACYBPQ9HB71 228 aaKnown RBP0.36□□□□□ -2.35
R3HDM1-219ENST00000488035 UBR2Q8IWV8 1755 aa0.36□□□□□ -2.35
R3HDM1-219ENST00000488035 KDM6AO15550 1401 aaPredicted RBP0.36□□□□□ -2.35
R3HDM1-219ENST00000488035 MUC4Q99102 2169 aa0.36□□□□□ -2.35
R3HDM1-219ENST00000488035 COL24A1Q17RW2 1714 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 C9orf170A2RU37 121 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 RIIAD1A6NNX1 92 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 C5orf67F2Z3F1 127 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 MFSD11O43934 449 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 PPYP01298 95 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 ARF6P62330 175 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 EIF3IQ13347 325 aaKnown RBP0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 AKR1C8PQ5T2L2 129 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 ARPINQ7Z6K5 226 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 SMIM20Q8N5G0 67 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 PPTC7Q8NI37 304 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 CARD19Q96LW7 228 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 RNF11Q9Y3C5 154 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
R3HDM1-219ENST00000488035 ZDBF2Q9HCK1 2354 aa0.34□□□□□ -2.35
R3HDM1-219ENST00000488035 TRAV27A0A087WT01 109 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 AIPO00170 330 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 RER1O15258 196 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 CSN2P05814 226 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 KLRD1Q13241 179 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 OR5AS1Q8N127 324 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 CDC26Q8NHZ8 85 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 PSMF1Q92530 271 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 GINS3Q9BRX5 216 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 SH3BGRL3Q9H299 93 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 LYRM2Q9NU23 88 aaPredicted RBP0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 SSR3Q9UNL2 185 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 MYH3P11055 1940 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 MYLKQ15746 1914 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 SPTBP11277 2137 aa0.34□□□□□ -2.36
R3HDM1-219ENST00000488035 TRAV23DV6A0A075B6W5 121 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 IGLV3-32A0A0A0MS00 114 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 JMJD7-PLA2G4BH0Y9G9 81 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 IFNA1P01562 189 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 IGLV3-1P01715 115 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 CD14P08571 375 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 OGNP20774 298 aaKnown RBP0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 GNG3P63215 75 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 BASP1P80723 227 aaKnown RBP0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 LTC4SQ16873 150 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 SCGB2B2Q4G0G5 96 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 C10orf95Q9H7T3 257 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 OR52A1Q9UKL2 312 aa0.33□□□□□ -2.36
R3HDM1-219ENST00000488035 FRMPD1Q5SYB0 1578 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 A0A0D9SG42 100 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 hDV103S1A0JD37 113 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 IDO1P14902 403 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 GLRXP35754 106 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 TAS2R41P59536 307 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 RPL19P84098 196 aaKnown RBP0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 C1orf140Q5VVS0 124 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 LINC00575Q6W349 94 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 LYG2Q86SG7 212 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 LRRC18Q8N456 261 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 OR13C6PQ8NH95 151 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 AP3S1Q92572 193 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 HOPXQ9BPY8 73 aaPredicted RBP0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 PBDC1Q9BVG4 233 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 TAF9BQ9HBM6 251 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 UFC1Q9Y3C8 167 aa0.32□□□□□ -2.36
R3HDM1-219ENST00000488035 KMT2DO14686 5537 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 UHRF1BP1Q6BDS2 1440 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 CD109Q6YHK3 1445 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 K7EIL1 84 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 HIST1H2BKO60814 126 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 IFNA14P01570 189 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 HIST1H2BJP06899 126 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 FXYD4P59646 89 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 HBBP68871 147 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 MIR22HGQ0VDD5 57 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 SPATA45Q537H7 98 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 FKBP1CQ5VVH2 108 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 SPATA8Q6RVD6 105 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 FOXI2Q6ZQN5 318 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 PHF5AQ7RTV0 110 aaKnown RBP0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 IFT20Q8IY31 132 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 OR10AC1Q8NH08 325 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 OR10AG1Q8NH19 301 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 ZNF431Q8TF32 576 aaPredicted RBP0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 PRRT1Q99946 306 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 LIMD2Q9BT23 127 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 TRPM1Q7Z4N2 1603 aa0.31□□□□□ -2.36
R3HDM1-219ENST00000488035 PTPRDP23468 1912 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 BCL9O00512 1426 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 NUPR2A6NF83 97 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 TMEM238C9JI98 176 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 APOA2P02652 100 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 PRH1P02810 166 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 PPP1R2P41236 205 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 MAP1LC3BQ9GZQ8 125 aa0.3□□□□□ -2.36
R3HDM1-219ENST00000488035 OTORQ9NRC9 128 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms