RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 EXOC3-AS1Q8N2X6 119 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 LINC00479Q96M42 142 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 AURKAIP1Q9NWT8 199 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-211ENST00000487698 HIVEP1P15822 2718 aa7.23□□□□□ -1.25
SF3B1-211ENST00000487698 ISLRO14498 428 aa7.23□□□□□ -1.25
SF3B1-211ENST00000487698 ZNF207O43670 478 aaKnown RBP7.23□□□□□ -1.25
SF3B1-211ENST00000487698 RNASE1P07998 156 aaKnown RBP7.23□□□□□ -1.25
SF3B1-211ENST00000487698 SRD5A1P18405 259 aa7.23□□□□□ -1.25
SF3B1-211ENST00000487698 TMEM183BQ1AE95 376 aa7.23□□□□□ -1.25
SF3B1-211ENST00000487698 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
SF3B1-211ENST00000487698 UBE2E2Q96LR5 201 aa7.23□□□□□ -1.25
SF3B1-211ENST00000487698 LGALS1P09382 135 aaKnown RBP7.22□□□□□ -1.25
SF3B1-211ENST00000487698 OR5B12Q96R08 314 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
SF3B1-211ENST00000487698 TRAV34A0A0B4J273 112 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 ATF4P18848 351 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-211ENST00000487698 HILS1P60008 231 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 PSG9Q00887 426 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 ELOBQ15370 118 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 C16orf54Q6UWD8 224 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 GPHB5Q86YW7 130 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 KLHDC1Q8N7A1 406 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 WIPF2Q8TF74 440 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-211ENST00000487698 GLMPQ8WWB7 406 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 SFRP2Q96HF1 295 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 FMC1Q96HJ9 113 aa7.22□□□□□ -1.25
SF3B1-211ENST00000487698 IGHV3OR16-13A0A075B7E8 117 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 IGHV3-49A0A0A0MS15 119 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 IGHV3-74A0A0B4J1X5 117 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 IGHV3-66A0A0C4DH42 116 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 H7BYZ3 331 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 GCGP01275 180 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 IGLV2-11P01706 119 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.25
SF3B1-211ENST00000487698 GALR1P47211 349 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 TCTEX1D4Q5JR98 221 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 FAM24BQ8N5W8 94 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 CMTM2Q8TAZ6 248 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 ZNF331Q9NQX6 463 aaPredicted RBP7.21□□□□□ -1.25
SF3B1-211ENST00000487698 DAZ1Q9NQZ3 744 aaKnown RBP7.21□□□□□ -1.25
SF3B1-211ENST00000487698 RPH3ALQ9UNE2 315 aa7.21□□□□□ -1.25
SF3B1-211ENST00000487698 TRBV6-1A0A0K0K1D8 114 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 M0R3E3 92 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 PPP1R2P9O14990 202 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 LTAP01374 205 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 FOSL1P15407 271 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 UBE2G1P62253 170 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 Q86TA4 180 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 ARL6IP6Q8N6S5 226 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 ZNF418Q8TF45 676 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-211ENST00000487698 SMIM12Q96EX1 92 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 AAMDCQ9H7C9 122 aa7.21□□□□□ -1.26
SF3B1-211ENST00000487698 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 K7EMT4 169 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
SF3B1-211ENST00000487698 MEOX2P50222 304 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 TMEM75Q8N9X5 138 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 MLST8Q9BVC4 326 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 C16orf95Q9H693 158 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 URGCP-MRPS24S4R325 110 aa7.2□□□□□ -1.26
SF3B1-211ENST00000487698 IGHV7-4-1A0A0J9YVY3 117 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 ZNF320A2RRD8 509 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 A8MWP6 167 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 CXCL1P09341 107 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 FOLR2P14207 255 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 RAB5AP20339 215 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 CDX1P47902 265 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-211ENST00000487698 OR5I1Q13606 314 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 RPEL1Q2QD12 228 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 FAM106AQ4KMX7 169 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 BAGE2Q86Y30 109 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 NHLRC2Q8NBF2 726 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 OR10G8Q8NGN5 311 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 SLC50A1Q9BRV3 221 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 FN1P02751 2386 aaKnown RBP7.19□□□□□ -1.26
SF3B1-211ENST00000487698 SETD2Q9BYW2 2564 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-211ENST00000487698 SETXQ7Z333 2677 aaKnown RBP7.19□□□□□ -1.26
SF3B1-211ENST00000487698 TRBV24-1A0A075B6N3 115 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 IGHV4OR15-8A0A075B7B6 117 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 A0A087WW49 117 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 TRAV8-1A0A0A6YYK1 113 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 TGIF2-C20orf24A0A0A6YYL0 155 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 A0A1W2PS18 150 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 ZNF785A8K8V0 405 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 TM4SF20Q53R12 229 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 REC114Q7Z4M0 266 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 GRAMD2BQ96HH9 432 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 PYGO2Q9BRQ0 406 aa7.19□□□□□ -1.26
SF3B1-211ENST00000487698 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 LGALS9O00182 355 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 HLA-DMBP28068 263 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 PSG3Q16557 428 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 C18orf65Q6ZTR6 163 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
SF3B1-211ENST00000487698 IMMP2LQ96T52 175 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms