RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 MARC2Q969Z3 335 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
SEMA4D-219ENST00000486935 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 OR11H12B2RN74 326 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 FGF8P55075 233 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 ZNF767PQ75MW2 155 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 EDA2RQ9HAV5 297 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 RETNQ9HD89 108 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 MLXQ9UH92 298 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 RNF24Q9Y225 148 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 DNAH7Q8WXX0 4024 aa11.54□□□□□ -0.56
SEMA4D-219ENST00000486935 RBMY1BA6NDE4 496 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 RBMY1EA6NEQ0 496 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 H2AFB1P0C5Y9 115 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 RBMY1DP0C7P1 496 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 STAG3L2P0CL84 134 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 STAG3L3P0CL85 134 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 PYYP10082 97 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 C1orf194Q5T5A4 169 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 PAXXQ9BUH6 204 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
SEMA4D-219ENST00000486935 CXorf1O96002 111 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 SNRPCP09234 159 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 OR10J4P0C629 311 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 GALR1P47211 349 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 UBE2L3P68036 154 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 BLOC1S1P78537 153 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 TMEM61Q8N0U2 210 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 SAT2Q96F10 170 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 OR51M1Q9H341 326 aa11.52□□□□□ -0.57
SEMA4D-219ENST00000486935 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 H3BTX0 84 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 GCHFRP30047 84 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 MBD3L1Q8WWY6 194 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 GPR82Q96P67 336 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 TMEM14CQ9P0S9 112 aa11.51□□□□□ -0.57
SEMA4D-219ENST00000486935 HELTA6NFD8 242 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 MRPS12O15235 138 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 HBE1P02100 147 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 RAB14P61106 215 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 RBPMS2Q6ZRY4 209 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 STXBP6Q8NFX7 210 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 BLNKQ8WV28 456 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 FXYD5Q96DB9 178 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 HRH4Q9H3N8 390 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 TMPRSS5Q9H3S3 457 aa11.5□□□□□ -0.57
SEMA4D-219ENST00000486935 TEX46H3BTG2 121 aa11.49□□□□□ -0.57
SEMA4D-219ENST00000486935 NMBP08949 121 aa11.49□□□□□ -0.57
SEMA4D-219ENST00000486935 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
SEMA4D-219ENST00000486935 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
SEMA4D-219ENST00000486935 ZNF586Q9NXT0 402 aa11.49□□□□□ -0.57
SEMA4D-219ENST00000486935 H3BQ15 152 aa11.48□□□□□ -0.57
SEMA4D-219ENST00000486935 RGS13O14921 159 aa11.48□□□□□ -0.57
SEMA4D-219ENST00000486935 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-219ENST00000486935 FAM90A2PQ658T7 463 aa11.48□□□□□ -0.57
SEMA4D-219ENST00000486935 A0A087X0K7 114 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 TRAV1-1A0A0B4J248 108 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 TFPI2P48307 235 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 CCL20P78556 96 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 WFDC3Q8IUB2 231 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 C17orf77Q96MU5 243 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
SEMA4D-219ENST00000486935 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 SLC17A3O00476 420 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 CD5P06127 495 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 UBE2G2P60604 165 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 MS4A6AQ9H2W1 248 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 NRN1Q9NPD7 142 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 SACSQ9NZJ4 4579 aa11.46□□□□□ -0.57
SEMA4D-219ENST00000486935 TRBV19A0A075B6N1 114 aa11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 LCE6AA0A183 80 aa11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 PSMB3P49720 205 aa11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 GUK1Q16774 197 aa11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 CLLU1Q5K131 121 aa11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
SEMA4D-219ENST00000486935 RYR2Q92736 4967 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms