RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 IGKV1OR2-108A0A075B7D4 117 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 A8MWL6 223 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 HYPMO75409 117 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 HSBP1O75506 76 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 OR2J3O76001 311 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 IGHV4-59P01825 116 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 SLC25A5P05141 298 aaKnown RBP7.12□□□□□ -1.27
COL12A1-208ENST00000486533 SNRPCP09234 159 aaKnown RBP7.12□□□□□ -1.27
COL12A1-208ENST00000486533 PMCHP20382 165 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 SRIP30626 198 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 S100A7P31151 101 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 PLP1P60201 277 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 PRB3Q04118 309 aaPredicted RBP7.12□□□□□ -1.27
COL12A1-208ENST00000486533 PRR31Q5SQ13 230 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 TMEM200BQ69YZ2 307 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 TMEM86BQ8N661 226 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 LY6G5BQ8NDX9 201 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 VN1R17PQ8TDU5 208 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 DAZAP1Q96EP5 407 aaKnown RBP7.12□□□□□ -1.27
COL12A1-208ENST00000486533 GPR82Q96P67 336 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 ATG101Q9BSB4 218 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 NRN1Q9NPD7 142 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1B0GUS0 222 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1W2PRD5 423 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1W2PRF3 423 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1W2PRM7 423 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 K7EQM0 130 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 EREGO14944 169 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 CRYGCP07315 174 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 MYOD1P15172 320 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 MFAP2P55001 183 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 DLX1P56177 255 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 GAGE1Q13065 139 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 FXYD3Q14802 87 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 COL5A1-AS1Q5SY13 56 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 PVRIGQ6DKI7 326 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 MRPL54Q6P161 138 aaKnown RBP7.12□□□□□ -1.27
COL12A1-208ENST00000486533 LINC00305Q7Z4B0 112 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 KIR3DL3Q8N743 410 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 OR10W1Q8NGF6 305 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 NPIPB3Q92617 1050 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 NEU1Q99519 415 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 SNHG12Q9BXW3 62 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 TMEM133Q9H2Q1 129 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 C1RLQ9NZP8 487 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 TP53TG3Q9ULZ0 132 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 EPDR1Q9UM22 224 aa7.12□□□□□ -1.27
COL12A1-208ENST00000486533 VWFP04275 2813 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 TRBV6-1A0A0K0K1D8 114 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1B0GW15 77 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 BMPR1BO00238 502 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 TOMM40O96008 361 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 TCL1AP56279 114 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 HBBP68871 147 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 KLRD1Q13241 179 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 PRSS8Q16651 343 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 TMEM116Q8NCL8 245 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 OR2T6Q8NHC8 308 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 C8orf46Q8TAG6 207 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 ST6GALNAC6Q969X2 333 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
COL12A1-208ENST00000486533 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 FAM103A1Q9BTL3 118 aaKnown RBP7.11□□□□□ -1.27
COL12A1-208ENST00000486533 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
COL12A1-208ENST00000486533 TMEM14CQ9P0S9 112 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 HIGD1AQ9Y241 93 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 PAM16Q9Y3D7 125 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 KLF12Q9Y4X4 402 aa7.11□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1W2PS18 150 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 NPFFO15130 113 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 SLC25A17O43808 307 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 NUPR1O60356 82 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 NDUFA7O95182 113 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 IGLV2-23P01705 113 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 P01737 135 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 NBEAP1P0C6P0 100 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 IGHV1-8P0DP01 117 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 CCL3L1P16619 93 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 GATA2P23769 480 aaPredicted RBP7.1□□□□□ -1.27
COL12A1-208ENST00000486533 HNRNPA3P51991 378 aaKnown RBP7.1□□□□□ -1.27
COL12A1-208ENST00000486533 WT1-ASQ06250 92 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 SPATA45Q537H7 98 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 OR1B1Q8NGR6 318 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 TXN2Q99757 166 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 CLEC7AQ9BXN2 247 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 OTORQ9NRC9 128 aa7.1□□□□□ -1.27
COL12A1-208ENST00000486533 WNK1Q9H4A3 2382 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 A0A1W2PPI3 338 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 CLPSL1A2RUU4 121 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 FBLL1A6NHQ2 334 aaKnown RBP7.09□□□□□ -1.27
COL12A1-208ENST00000486533 M0R1W7 72 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 M0R2Z0 102 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 OR5AL1P0C617 328 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 SAA4P35542 130 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 MYCNOSP40205 109 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 LINC00310P59036 64 aa7.09□□□□□ -1.27
COL12A1-208ENST00000486533 MMDQ15546 238 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms