RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 RLN2P04090 185 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 FGF7P21781 194 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 HBG1P69891 147 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 HBG2P69892 147 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 C12orf74Q32Q52 190 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 MORN5Q5VZ52 161 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 ZNF705AQ6ZN79 300 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-204ENST00000486023 BPIFA4PQ86YQ2 179 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 C1orf158Q8N1D5 194 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 CLUHP3Q96NS8 147 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 DNAJC4Q9NNZ3 241 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 RNF24Q9Y225 148 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 ZNF705FA8MVS1 300 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-204ENST00000486023 SSNA1O43805 119 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 HBE1P02100 147 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 CXCL3P19876 107 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 DEFA1P59665 94 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 DEFA3P59666 94 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 OPCMLQ14982 345 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 PSG3Q16557 428 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 WDR83OSQ9Y284 106 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 RFNGQ9Y644 331 aa12.69□□□□□ -0.38
COL6A1-204ENST00000486023 EPPK1P58107 5090 aaKnown RBP12.68□□□□□ -0.38
COL6A1-204ENST00000486023 TRAV12-2A0A075B6T6 113 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 A0A087X0K7 114 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 DEFB131BA0A096LNP1 70 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 PRM2P04554 102 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 SPART-AS1P0CW21 52 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 NHLH2Q02577 135 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
COL6A1-204ENST00000486023 OR1L4Q8NGR5 311 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
COL6A1-204ENST00000486023 OR5AC2Q9NZP5 309 aa12.68□□□□□ -0.38
COL6A1-204ENST00000486023 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 MRPS12O15235 138 aaKnown RBP12.67□□□□□ -0.38
COL6A1-204ENST00000486023 PRAF2O60831 178 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 B2MP61769 119 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 ATP6V1FQ16864 119 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 RRN3P1Q2M238 152 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 AMTNQ6UX39 209 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 OR8A1Q8NGG7 326 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 IGF2BP2-AS1Q96M15 143 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 NEU1Q99519 415 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 SLC39A9Q9NUM3 307 aa12.67□□□□□ -0.38
COL6A1-204ENST00000486023 TMEM189A5PLL7 270 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 ZNF705GA8MUZ8 300 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-204ENST00000486023 HTN1P15515 57 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 PRR20EP86478 221 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 PRR20CP86479 221 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 PRR20DP86480 221 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 PRR20BP86481 221 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 PRR20AP86496 221 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 LGALS9CQ6DKI2 356 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 LCN15Q6UWW0 184 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 THAP6Q8TBB0 222 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 NMES1Q9C002 83 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 SLC25A31Q9H0C2 315 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 PXMP4Q9Y6I8 212 aa12.66□□□□□ -0.38
COL6A1-204ENST00000486023 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 E5RGE8 158 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 H3BQ15 152 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 INSP01308 110 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 HTN3P15516 51 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
COL6A1-204ENST00000486023 CLINT1Q14677 625 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 FAM222AQ5U5X8 452 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 PFDN5Q99471 154 aa12.65□□□□□ -0.38
COL6A1-204ENST00000486023 H0YIZ8 118 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 BOLA2-SMG1P6H3BVE0 249 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 SLC17A3O00476 420 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 AMBPP02760 352 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 CYCSP99999 105 aaKnown RBP12.64□□□□□ -0.39
COL6A1-204ENST00000486023 LINC01587Q99440 93 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 SLC50A1Q9BRV3 221 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 MARVELD1Q9BSK0 173 aa12.64□□□□□ -0.39
COL6A1-204ENST00000486023 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-204ENST00000486023 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
COL6A1-204ENST00000486023 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
COL6A1-204ENST00000486023 CRXO43186 299 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-204ENST00000486023 H2BFSP57053 126 aa12.63□□□□□ -0.39
COL6A1-204ENST00000486023 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
COL6A1-204ENST00000486023 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
COL6A1-204ENST00000486023 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
COL6A1-204ENST00000486023 VPS13DQ5THJ4 4388 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 A8MTW9 85 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 J3KRW8 73 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 CXCL2P19875 107 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 TCTAP57738 103 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 PPP1R1CQ8WVI7 109 aa12.62□□□□□ -0.39
COL6A1-204ENST00000486023 NPCDR1Q9BY65 106 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms