RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SOCS3O14543 225 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 AGPAT2O15120 278 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 GIG44P09565 113 aaPredicted RBP5.39□□□□□ -1.55
CPNE1-226ENST00000486021 H2AFB2P0C5Z0 115 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 PET100P0DJ07 73 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 CDKN1BP46527 198 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 CAV2P51636 162 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 EMP1P54849 157 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 FAM3BP58499 235 aaPredicted RBP5.39□□□□□ -1.55
CPNE1-226ENST00000486021 RNF212Q495C1 297 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 ZNF493Q6ZR52 646 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 LINC00305Q7Z4B0 112 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 POM121L12Q8N7R1 296 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 ENKURQ8TC29 256 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 C16orf74Q96GX8 76 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 SLC25A31Q9H0C2 315 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 DNAJC4Q9NNZ3 241 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 UQCC1Q9NVA1 299 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 FLVCR2Q9UPI3 526 aa5.39□□□□□ -1.55
CPNE1-226ENST00000486021 RCL1Q9Y2P8 373 aaKnown RBP5.39□□□□□ -1.55
CPNE1-226ENST00000486021 LSM5Q9Y4Y9 91 aaKnown RBP5.39□□□□□ -1.55
CPNE1-226ENST00000486021 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 TENM2Q9NT68 2774 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 TRAV6A0A075B6T7 132 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 A8MTW9 85 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 C17orf112F2Z3M2 114 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 PRAF2O60831 178 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 UPK1BO75841 260 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 GATA2P23769 480 aaPredicted RBP5.38□□□□□ -1.55
CPNE1-226ENST00000486021 CAMLGP49069 296 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 CNN1P51911 297 aaKnown RBP5.38□□□□□ -1.55
CPNE1-226ENST00000486021 FXYD7P58549 80 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 HIST1H1AQ02539 215 aaPredicted RBP5.38□□□□□ -1.55
CPNE1-226ENST00000486021 BAXQ07812 192 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 SLC38A11Q08AI6 406 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 C12orf74Q32Q52 190 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 FAM222AQ5U5X8 452 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 ZNF709Q8N972 641 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 OR8A1Q8NGG7 326 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 LINC01587Q99440 93 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 ATG101Q9BSB4 218 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 SLC35B3Q9H1N7 401 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 AAMDCQ9H7C9 122 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 NUDT15Q9NV35 164 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 DKK2Q9UBU2 259 aa5.38□□□□□ -1.55
CPNE1-226ENST00000486021 TIMM8BQ9Y5J9 83 aaPredicted RBP5.38□□□□□ -1.55
CPNE1-226ENST00000486021 LYSTQ99698 3801 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 C7orf66A4D0T2 115 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 PMS2P5A8MQ11 134 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 SNURFLB1AK76 121 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 H7BYZ3 331 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 ZNF253O75346 499 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 MBPP02686 304 aaPredicted RBP5.37□□□□□ -1.55
CPNE1-226ENST00000486021 ATP5G1P05496 136 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 CXCL3P19876 107 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 LEPP41159 167 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 RPL29P47914 159 aaKnown RBP5.37□□□□□ -1.55
CPNE1-226ENST00000486021 ATP5G3P48201 142 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 SULT1A1P50225 295 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 TAS2R60P59551 318 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 S100A10P60903 97 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 SPINK13Q1W4C9 94 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 NRARPQ7Z6K4 114 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 OR11H7Q8NGC8 314 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 RPUSD4Q96CM3 377 aaKnown RBP5.37□□□□□ -1.55
CPNE1-226ENST00000486021 SCRT1Q9BWW7 348 aa5.37□□□□□ -1.55
CPNE1-226ENST00000486021 YTHDF2Q9Y5A9 579 aaKnown RBP5.37□□□□□ -1.55
CPNE1-226ENST00000486021 KMT2CQ8NEZ4 4911 aaKnown RBP5.37□□□□□ -1.55
CPNE1-226ENST00000486021 LOC105371267A0A1B0GV96 52 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 E5RGE8 158 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 F6UB75 175 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 HTN3P15516 51 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 BTCP35070 178 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 CCL18P55774 89 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 PDE6HQ13956 83 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 MRPL53Q96EL3 112 aaKnown RBP5.36□□□□□ -1.55
CPNE1-226ENST00000486021 UHRF2Q96PU4 802 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 ODF3Q96PU9 254 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 ZNF331Q9NQX6 463 aaPredicted RBP5.36□□□□□ -1.55
CPNE1-226ENST00000486021 LYRM2Q9NU23 88 aaPredicted RBP5.36□□□□□ -1.55
CPNE1-226ENST00000486021 CELA1Q9UNI1 258 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 TIMM9Q9Y5J7 89 aa5.36□□□□□ -1.55
CPNE1-226ENST00000486021 CBY3A6NI87 242 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 M0R2Z0 102 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 PLA2G10O15496 165 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 HIST1H1EP10412 219 aaKnown RBP5.35□□□□□ -1.55
CPNE1-226ENST00000486021 S100A12P80511 92 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 CLINT1Q14677 625 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 LGALS9BQ3B8N2 356 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 C1orf158Q8N1D5 194 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 RPP25LQ8N5L8 163 aaKnown RBP5.35□□□□□ -1.55
CPNE1-226ENST00000486021 TMEM263Q8WUH6 116 aaKnown RBP5.35□□□□□ -1.55
CPNE1-226ENST00000486021 LINC00477Q96M19 166 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 SDHCQ99643 169 aaPredicted RBP5.35□□□□□ -1.55
CPNE1-226ENST00000486021 NMES1Q9C002 83 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 WDR83OSQ9Y284 106 aa5.35□□□□□ -1.55
CPNE1-226ENST00000486021 UBE2L5PA0A1B0GUS4 154 aa5.34□□□□□ -1.55
CPNE1-226ENST00000486021 FAM24AA6NFZ4 105 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms