RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
HLA-DOA-204ENST00000485901 SMIM3Q9BZL3 60 aa8.76□□□□□ -1.01
HLA-DOA-204ENST00000485901 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
HLA-DOA-204ENST00000485901 MRPS12O15235 138 aaKnown RBP8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 LY6G6CO95867 125 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 CXCL2P19875 107 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 MORN5Q5VZ52 161 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 CEMP1Q6PRD7 247 aaPredicted RBP8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 C20orf173Q96LM9 149 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 CLUHP3Q96NS8 147 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 RARRES2Q99969 163 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 C1QTNF4Q9BXJ3 329 aa8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 PARD6GQ9BYG4 376 aaPredicted RBP8.75□□□□□ -1.01
HLA-DOA-204ENST00000485901 TRAV8-2A0A0B4J237 113 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 TRAV5A0A0B4J249 113 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 GUK1Q16774 197 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 Q5BKY6 102 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 GDF5OSQ5U4N7 250 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 FAM78BQ5VT40 261 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 LCN15Q6UWW0 184 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 INO80EQ8NBZ0 244 aaPredicted RBP8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 OR4B1Q8NGF8 309 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 OR2T35Q8NGX2 323 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 OR11H2Q8NH07 326 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 AQP10Q96PS8 301 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 SLC50A1Q9BRV3 221 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 HRH4Q9H3N8 390 aa8.74□□□□□ -1.01
HLA-DOA-204ENST00000485901 AGRNO00468 2067 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 A0A0J9YX75 114 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 CXorf65A6NEN9 183 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 IGKV3-20P01619 116 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 DEFB1P60022 68 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 PSG3Q16557 428 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 ZNF738Q8NE65 137 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 WFDC1Q9HC57 220 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 ZNF331Q9NQX6 463 aaPredicted RBP8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 CLEC5AQ9NY25 188 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 TMEM14CQ9P0S9 112 aa8.73□□□□□ -1.01
HLA-DOA-204ENST00000485901 F6UB75 175 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 H3BQ15 152 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 SNRPCP09234 159 aaKnown RBP8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 C4BPBP20851 252 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 TCTAP57738 103 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 PSG9Q00887 426 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 ZNF266Q14584 549 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 XCL2Q9UBD3 114 aa8.72□□□□□ -1.01
HLA-DOA-204ENST00000485901 FXYD6-FXYD2A0A087WZ82 144 aa8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 HIST1H1EP10412 219 aaKnown RBP8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 FFAR4Q5NUL3 377 aa8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 MIR17HGQ75NE6 70 aa8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 CSNK1G2-AS1Q8NCQ2 148 aa8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
HLA-DOA-204ENST00000485901 TRBV19A0A075B6N1 114 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 H3BTX0 84 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF253O75346 499 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 HLA-DMBP28068 263 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 CNN1P51911 297 aaKnown RBP8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 ACOT6Q3I5F7 207 aaPredicted RBP8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR8A1Q8NGG7 326 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 RPUSD4Q96CM3 377 aaKnown RBP8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 SLC25A2Q9BXI2 301 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR51M1Q9H341 326 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF586Q9NXT0 402 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 TNFSF18Q9UNG2 199 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 FUT9Q9Y231 359 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 TIMM9Q9Y5J7 89 aa8.7□□□□□ -1.02
HLA-DOA-204ENST00000485901 DNAH10Q8IVF4 4471 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 A8MTW9 85 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF705EA8MWA4 302 aaPredicted RBP8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 SLC17A3O00476 420 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 AMBPP02760 352 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF705DP0CH99 300 aaPredicted RBP8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF705BP0CI00 300 aaPredicted RBP8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 PYYP10082 97 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 MIFP14174 115 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 FXYD7P58549 80 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 TAS2R45P59539 299 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 RHOBP62745 196 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 PDE6HQ13956 83 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 PAXXQ9BUH6 204 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 MFFQ9GZY8 342 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 SLC35B3Q9H1N7 401 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 PPP1R14DQ9NXH3 145 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 HERC2O95714 4834 aa8.69□□□□□ -1.02
HLA-DOA-204ENST00000485901 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 A0A1W2PPV4 95 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 NBEAP1P0C6P0 100 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 M6PRP20645 277 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms