RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CCDC90BQ9GZT6 254 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 CACNG5Q9UF02 275 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 LPAP08519 4548 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 TRGV1A0A0A0MS02 117 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 IGHV3-38A0A0C4DH36 116 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 IBA57-AS1B1ANH7 110 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 E5RGE8 158 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 OR5AC1P0C628 307 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 SLC25A4P12235 298 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PSMB9P28065 219 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 CBX5P45973 191 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 CDKN1BP46527 198 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 MEOX2P50222 304 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 GNGT1P63211 74 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 HIST1H1AQ02539 215 aaPredicted RBP3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PSG3Q16557 428 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PHLDA2Q53GA4 152 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 C1orf194Q5T5A4 169 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 SAMD13Q5VXD3 122 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 OR8G2PQ6IF36 304 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 CFAP161Q6P656 301 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 ZNF738Q8NE65 137 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 ZNF555Q8NEP9 628 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 OR52E5Q8NH55 327 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PYDC1Q8WXC3 89 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 IL22RA2Q969J5 263 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 ACY3Q96HD9 319 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 RSG1Q9BU20 258 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PAXXQ9BUH6 204 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PDCD10Q9BUL8 212 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 ENY2Q9NPA8 101 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 PRO0255Q9UI72 69 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 HHLA3Q9XRX5 114 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 FUT9Q9Y231 359 aa3.44□□□□□ -1.86
PTPN4-210ENST00000485247 TRAV8-2A0A0B4J237 113 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 IFITM5A6NNB3 132 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 K7EQD1 137 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 CASQ2O14958 399 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-210ENST00000485247 IGHV3-30P01768 117 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 IGHV3-33P01772 117 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 PRSS2P07478 247 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 HSMCR30P0CW71 290 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 IGHV3-30-3P0DP02 117 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 IGHV3-30-5P0DP03 117 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 SRIP30626 198 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 GALR1P47211 349 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 CRYBA4P53673 196 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 LYZP61626 148 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 FGL1Q08830 312 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 DAZ2Q13117 558 aaKnown RBP3.43□□□□□ -1.86
PTPN4-210ENST00000485247 TDRG1Q3Y452 100 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 IDNKQ5T6J7 187 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 HOGA1Q86XE5 327 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 ARRDC1Q8N5I2 433 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 SLC24A4Q8NFF2 622 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 BAALCQ8WXS3 180 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 UFD1Q92890 307 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 ZNF2Q9BSG1 426 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-210ENST00000485247 PARD6GQ9BYG4 376 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-210ENST00000485247 SLC25A22Q9H936 323 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 GSN-AS1Q9NRJ2 163 aa3.43□□□□□ -1.86
PTPN4-210ENST00000485247 RRP15Q9Y3B9 282 aaKnown RBP3.43□□□□□ -1.86
PTPN4-210ENST00000485247 GPR31O00270 319 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 PDCD5O14737 125 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 HOXB5P09067 269 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 GATA2P23769 480 aaPredicted RBP3.42□□□□□ -1.86
PTPN4-210ENST00000485247 HTR2BP41595 481 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 AMTP48728 403 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 TAS2R20P59543 309 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 FABP5Q01469 135 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 ZNF90Q03938 601 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 SPHARQ15513 63 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 BSXQ3C1V8 233 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 LINC01556Q5JQF7 62 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 ETFRF1Q6IPR1 90 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 THAP8Q8NA92 274 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 HSD17B11Q8NBQ5 300 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 CCDC197Q8NCU1 140 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 OR5AP2Q8NGF4 316 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 BLNKQ8WV28 456 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 TMED6Q8WW62 240 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 C9orf16Q9BUW7 83 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 MND1Q9BWT6 205 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 EHFQ9NZC4 300 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 PSORS1C1Q9UIG5 152 aa3.42□□□□□ -1.86
PTPN4-210ENST00000485247 SMIM30A4D0T7 59 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 MEIS3P1A6NDR6 274 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 ZFP92A6NM28 416 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 C9JCJ5 164 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 PTGES3LE9PB15 166 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 IGKV1-5P01602 117 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 PSMA1P25786 263 aaKnown RBP3.41□□□□□ -1.86
PTPN4-210ENST00000485247 AKR1C2P52895 323 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 SLAQ13239 276 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 OR2F1Q13607 317 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms