RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 SAV1Q9H4B6 383 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-227ENST00000485102 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 MBD2Q9UBB5 411 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 LRP1BQ9NZR2 4599 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 SMCO3A2RU48 225 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 TAAR5O14804 337 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 CCNKO75909 580 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 IFNA5P01569 189 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 C1orf194Q5T5A4 169 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 GDF5OSQ5U4N7 250 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 FAM222AQ5U5X8 452 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 ACOT7LQ6ZUV0 252 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 ZNF546Q86UE3 836 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 UBE2DNLQ8IWF7 75 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 THAP8Q8NA92 274 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 BPIFCQ8NFQ6 507 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 OR51G1Q8NGK1 321 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 SLC45A2Q9UMX9 530 aa9.24□□□□□ -0.93
HDAC6-227ENST00000485102 IGLV2-18A0A075B6J9 118 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 FAM24AA6NFZ4 105 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 PMS2P5A8MQ11 134 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 HMSDA8MTL9 139 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 PRSS46E5RG02 174 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 C17orf112F2Z3M2 114 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 SOCS3O14543 225 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 ID1P41134 155 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 PSMB3P49720 205 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 VWC2Q2TAL6 325 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 ZNF575Q86XF7 245 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 RNF125Q96EQ8 232 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 AQP10Q96PS8 301 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 OR5AC2Q9NZP5 309 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 HSPB11Q9Y547 144 aa9.23□□□□□ -0.93
HDAC6-227ENST00000485102 A8MTW9 85 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 CST7O76096 145 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 EMP1P54849 157 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 EIF5AP63241 154 aaKnown RBP9.22□□□□□ -0.93
HDAC6-227ENST00000485102 OR2F1Q13607 317 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 Q6ZRG5 221 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 OR5C1Q8NGR4 320 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 SCGB1C1Q8TD33 95 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 ATP5SQ99766 215 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 PARD6GQ9BYG4 376 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-227ENST00000485102 GOLT1BQ9Y3E0 138 aa9.22□□□□□ -0.93
HDAC6-227ENST00000485102 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 BORCS7-ASMTA0A0B4J1R7 106 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 A0A0D9SG52 128 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 ISLRO14498 428 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 PSG9Q00887 426 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 ZNF345Q14585 488 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 C1orf158Q8N1D5 194 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 HYLS1Q96M11 299 aa9.21□□□□□ -0.94
HDAC6-227ENST00000485102 IGHV3OR16-12A0A075B7B8 117 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 IGSF23A1L1A6 192 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 H0YIZ8 118 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 HBE1P02100 147 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 DEFB1P60022 68 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 RRN3P1Q2M238 152 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 CYP2G1PQ6ZSU1 146 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 OR1L4Q8NGR5 311 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 LINC00052Q96N35 136 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 PFDN5Q99471 154 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 SLC35B3Q9H1N7 401 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 WDR83OSQ9Y284 106 aa9.2□□□□□ -0.94
HDAC6-227ENST00000485102 YTHDF2Q9Y5A9 579 aaKnown RBP9.2□□□□□ -0.94
HDAC6-227ENST00000485102 IGKV1D-37A0A075B6S9 117 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 A0A0J9YX75 114 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 LOC102723971A0A1B0GUV8 181 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 IGKV3-20P01619 116 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 CAMLGP49069 296 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 FXYD7P58549 80 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 PLP1P60201 277 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 NHLH2Q02577 135 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 FAM78BQ5VT40 261 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 EBLN2Q6P2I7 272 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 TMEM88Q6PEY1 159 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 OR4B1Q8NGF8 309 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 GPR82Q96P67 336 aa9.19□□□□□ -0.94
HDAC6-227ENST00000485102 RPL29P47914 159 aaKnown RBP9.18□□□□□ -0.94
HDAC6-227ENST00000485102 MEOX2P50222 304 aa9.18□□□□□ -0.94
HDAC6-227ENST00000485102 DAD1P61803 113 aa9.18□□□□□ -0.94
HDAC6-227ENST00000485102 GNPNAT1Q96EK6 184 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-227ENST00000485102 IGF2BP2-AS1Q96M15 143 aa9.18□□□□□ -0.94
HDAC6-227ENST00000485102 PBDC1Q9BVG4 233 aa9.18□□□□□ -0.94
HDAC6-227ENST00000485102 RPRMQ9NS64 109 aa9.18□□□□□ -0.94
HDAC6-227ENST00000485102 UBE2L5PA0A1B0GUS4 154 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 KANTRA0A1W2PQU2 76 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 AGPAT2O15120 278 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 HYPMO75409 117 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 MBP02144 154 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms