RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 MBPP02686 304 aaPredicted RBP15.25■□□□□ 0.03
USP40-215ENST00000484528 PSG3Q16557 428 aa15.25■□□□□ 0.03
USP40-215ENST00000484528 OR8A1Q8NGG7 326 aa15.25■□□□□ 0.03
USP40-215ENST00000484528 MITD1Q8WV92 249 aa15.25■□□□□ 0.03
USP40-215ENST00000484528 FNDC10F2Z333 226 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 K7EPK0 472 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 GOSR2O14653 212 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 DEFB130BP0DP73 79 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 DEFB130AP0DP74 79 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 AZU1P20160 251 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 C20orf85Q9H1P6 137 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 PPP1R14DQ9NXH3 145 aa15.24■□□□□ 0.03
USP40-215ENST00000484528 C7orf66A4D0T2 115 aa15.23■□□□□ 0.03
USP40-215ENST00000484528 AGPAT2O15120 278 aa15.23■□□□□ 0.03
USP40-215ENST00000484528 MRPS12O15235 138 aaKnown RBP15.23■□□□□ 0.03
USP40-215ENST00000484528 TAS2R30P59541 319 aa15.23■□□□□ 0.03
USP40-215ENST00000484528 FCN2Q15485 313 aa15.23■□□□□ 0.03
USP40-215ENST00000484528 LGALS9BQ3B8N2 356 aa15.23■□□□□ 0.03
USP40-215ENST00000484528 ZNF546Q86UE3 836 aa15.23■□□□□ 0.03
USP40-215ENST00000484528 RPUSD4Q96CM3 377 aaKnown RBP15.23■□□□□ 0.03
USP40-215ENST00000484528 PKHD1P08F94 4074 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 H3BTX0 84 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 PLA2G10O15496 165 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 HTN1P15515 57 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 LINC00305Q7Z4B0 112 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 S100A7AQ86SG5 101 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 LINC01587Q99440 93 aa15.22■□□□□ 0.03
USP40-215ENST00000484528 LSM5Q9Y4Y9 91 aaKnown RBP15.22■□□□□ 0.03
USP40-215ENST00000484528 PLAC8L1A1L4L8 177 aa15.21■□□□□ 0.03
USP40-215ENST00000484528 LYRM9A8MSI8 78 aa15.21■□□□□ 0.03
USP40-215ENST00000484528 FAM25EA8MYX2 175 aa15.21■□□□□ 0.03
USP40-215ENST00000484528 COX7A2P2O60397 106 aa15.21■□□□□ 0.03
USP40-215ENST00000484528 MORN5Q5VZ52 161 aa15.21■□□□□ 0.03
USP40-215ENST00000484528 MGST2Q99735 147 aa15.21■□□□□ 0.03
USP40-215ENST00000484528 TRAV6A0A075B6T7 132 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 L7N2F9 121 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 LYRM1O43325 122 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 TSPOP30536 169 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 B2MP61769 119 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 VAMP2P63027 116 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 ZNF846Q147U1 533 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 RNF212Q495C1 297 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 LCN15Q6UWW0 184 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 Q6ZR54 194 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 SEC22CQ9BRL7 303 aa15.2■□□□□ 0.02
USP40-215ENST00000484528 PARD6GQ9BYG4 376 aaPredicted RBP15.2■□□□□ 0.02
USP40-215ENST00000484528 SLC17A3O00476 420 aa15.19■□□□□ 0.02
USP40-215ENST00000484528 BCAP31P51572 246 aa15.19■□□□□ 0.02
USP40-215ENST00000484528 PXDC1Q5TGL8 231 aa15.19■□□□□ 0.02
USP40-215ENST00000484528 TMEM37Q8WXS4 190 aa15.19■□□□□ 0.02
USP40-215ENST00000484528 GGACTQ9BVM4 153 aa15.19■□□□□ 0.02
USP40-215ENST00000484528 ZNF331Q9NQX6 463 aaPredicted RBP15.19■□□□□ 0.02
USP40-215ENST00000484528 F5H768 121 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 CST7O76096 145 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 CAV2P51636 162 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 KIR3DS1Q14943 382 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 OPCMLQ14982 345 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 CNPY1Q3B7I2 92 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 TMEM256Q8N2U0 113 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 RNF24Q9Y225 148 aa15.18■□□□□ 0.02
USP40-215ENST00000484528 C5orf51A6NDU8 294 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 PRAC2D3DTV9 90 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 TCRBP04435 133 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 CXCL2P19875 107 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 C10orf113Q5VZT2 155 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 BPIFA4PQ86YQ2 179 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 C15orf53Q8NAA6 179 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 SLC50A1Q9BRV3 221 aa15.17■□□□□ 0.02
USP40-215ENST00000484528 CDKN1BP46527 198 aa15.16■□□□□ 0.02
USP40-215ENST00000484528 CAMLGP49069 296 aa15.16■□□□□ 0.02
USP40-215ENST00000484528 TAS2R60P59551 318 aa15.16■□□□□ 0.02
USP40-215ENST00000484528 MIC13Q5XKP0 118 aa15.16■□□□□ 0.02
USP40-215ENST00000484528 NUDT15Q9NV35 164 aa15.16■□□□□ 0.02
USP40-215ENST00000484528 MUC4Q99102 2169 aa15.16■□□□□ 0.02
USP40-215ENST00000484528 FAM24AA6NFZ4 105 aa15.15■□□□□ 0.02
USP40-215ENST00000484528 NUDT3O95989 172 aa15.15■□□□□ 0.02
USP40-215ENST00000484528 NRARPQ7Z6K4 114 aa15.15■□□□□ 0.02
USP40-215ENST00000484528 ZNF431Q8TF32 576 aaPredicted RBP15.15■□□□□ 0.02
USP40-215ENST00000484528 C16orf74Q96GX8 76 aa15.15■□□□□ 0.02
USP40-215ENST00000484528 ATG101Q9BSB4 218 aa15.15■□□□□ 0.02
USP40-215ENST00000484528 PKD1P98161 4303 aa15.15■□□□□ 0.02
USP40-215ENST00000484528 TRAV5A0A0B4J249 113 aa15.14■□□□□ 0.01
USP40-215ENST00000484528 H3BQ15 152 aa15.14■□□□□ 0.01
USP40-215ENST00000484528 ATP5G1P05496 136 aa15.14■□□□□ 0.01
USP40-215ENST00000484528 ATP5G3P48201 142 aa15.14■□□□□ 0.01
USP40-215ENST00000484528 S100A10P60903 97 aa15.14■□□□□ 0.01
USP40-215ENST00000484528 C11orf1Q9H5F2 150 aa15.14■□□□□ 0.01
USP40-215ENST00000484528 J3KRW8 73 aa15.13■□□□□ 0.01
USP40-215ENST00000484528 IGLC2P0DOY2 106 aa15.13■□□□□ 0.01
USP40-215ENST00000484528 C12orf45Q8N5I9 185 aaPredicted RBP15.13■□□□□ 0.01
USP40-215ENST00000484528 OR10J6PQ8NGY7 276 aa15.13■□□□□ 0.01
USP40-215ENST00000484528 NOP10Q9NPE3 64 aaKnown RBP15.13■□□□□ 0.01
USP40-215ENST00000484528 UQCC1Q9NVA1 299 aa15.13■□□□□ 0.01
USP40-215ENST00000484528 TIMM8BQ9Y5J9 83 aaPredicted RBP15.13■□□□□ 0.01
USP40-215ENST00000484528 DNAH11Q96DT5 4516 aa15.13■□□□□ 0.01
USP40-215ENST00000484528 UBE2L5PA0A1B0GUS4 154 aa15.12■□□□□ 0.01
USP40-215ENST00000484528 RAB31Q13636 194 aa15.12■□□□□ 0.01
USP40-215ENST00000484528 SOHLH1Q5JUK2 328 aa15.12■□□□□ 0.01
USP40-215ENST00000484528 C1orf134Q5TEV5 83 aa15.12■□□□□ 0.01
USP40-215ENST00000484528 GFI1BQ5VTD9 330 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms