RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 FBN3Q75N90 2809 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 TRBV19A0A075B6N1 114 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 TRAV8-2A0A0B4J237 113 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 TRAV1-1A0A0B4J248 108 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 A0A1W2PPV4 95 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 SLC17A3O00476 420 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 ISLRO14498 428 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 OR7C2O60412 319 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 EIF3GO75821 320 aaKnown RBP eCLIP4.79□□□□□ -1.64
NCL-209ENST00000484328 NDUFB4O95168 129 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 ARL14EPLP0DKL9 152 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 HIST1H1EP10412 219 aaKnown RBP4.79□□□□□ -1.64
NCL-209ENST00000484328 ATF4P18848 351 aaPredicted RBP4.79□□□□□ -1.64
NCL-209ENST00000484328 PSMB3P49720 205 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 FHITP49789 147 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 UBE2L3P68036 154 aaKnown RBP4.79□□□□□ -1.64
NCL-209ENST00000484328 PAFAH1B2P68402 229 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 PDE6HQ13956 83 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 GUCA2BQ16661 112 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 FAM74A1Q5RGS3 127 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 Q8N1Y9 231 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 MBD3L1Q8WWY6 194 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 SLC50A1Q9BRV3 221 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 PAXXQ9BUH6 204 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 MAP6D1Q9H9H5 199 aa4.79□□□□□ -1.64
NCL-209ENST00000484328 IGKV3-7A0A075B6H7 116 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 MAP1LC3B2A6NCE7 125 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 HMGB3O15347 200 aaKnown RBP4.78□□□□□ -1.64
NCL-209ENST00000484328 CXorf1O96002 111 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 CD7P09564 240 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 OR10J4P0C629 311 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 NBEAP1P0C6P0 100 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 GCHFRP30047 84 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 TFPI2P48307 235 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 RPL11P62913 178 aaKnown RBP4.78□□□□□ -1.64
NCL-209ENST00000484328 TEX261Q6UWH6 196 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 ALKAL2Q6UX46 152 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 GTSCR1Q86UQ5 136 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 GBGT1Q8N5D6 347 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 RNF141Q8WVD5 230 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 MAP1LC3BQ9GZQ8 125 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
NCL-209ENST00000484328 ARL2-SNX15V9GYD0 113 aa4.78□□□□□ -1.64
NCL-209ENST00000484328 SORL1Q92673 2214 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 DNAH3Q8TD57 4116 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 A8MTW9 85 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 A8MZ25 164 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 DNASE2O00115 360 aaPredicted RBP4.77□□□□□ -1.65
NCL-209ENST00000484328 ZNF688P0C7X2 276 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 FGF8P55075 233 aaPredicted RBP4.77□□□□□ -1.65
NCL-209ENST00000484328 CMC4P56277 68 aaPredicted RBP4.77□□□□□ -1.65
NCL-209ENST00000484328 CD81P60033 236 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 SNRPD3P62318 126 aaKnown RBP4.77□□□□□ -1.65
NCL-209ENST00000484328 PMS2P11Q13670 270 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 LYPD1Q8N2G4 141 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 RNF182Q8N6D2 247 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 ZNF680Q8NEM1 530 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 LYPD6BQ8NI32 183 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 MRPL53Q96EL3 112 aaKnown RBP4.77□□□□□ -1.65
NCL-209ENST00000484328 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 C20orf173Q96LM9 149 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 PRR25Q96S07 402 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 TMEM167BQ9NRX6 74 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 CLEC5AQ9NY25 188 aa4.77□□□□□ -1.65
NCL-209ENST00000484328 ZNF705EA8MWA4 302 aaPredicted RBP4.76□□□□□ -1.65
NCL-209ENST00000484328 OR11H12B2RN74 326 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 H3BTX0 84 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 HBE1P02100 147 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 SNRPCP09234 159 aaKnown RBP4.76□□□□□ -1.65
NCL-209ENST00000484328 H2AFB1P0C5Y9 115 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 ID1P41134 155 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 DEFB131AP59861 70 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 PSG9Q00887 426 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 PSMG4Q5JS54 123 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 ARL6IP6Q8N6S5 226 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 LRRC20Q8TCA0 184 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 SFT2D1Q8WV19 159 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 CLUHP3Q96NS8 147 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 CITED4Q96RK1 184 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 WFDC10AQ9H1F0 79 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 TMPRSS5Q9H3S3 457 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 PRELID1Q9Y255 219 aa4.76□□□□□ -1.65
NCL-209ENST00000484328 A0A0J9YX75 114 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 A0A1W2PRE2 83 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 FAM74A7A6NL05 159 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 K7EIL1 84 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 M0R3E3 92 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 IFNA7P01567 189 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 HLA-DRB4P13762 266 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 HLA-DMBP28068 263 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 BLOC1S1P78537 153 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 IFITM2Q01629 132 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 PSG3Q16557 428 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 IGFL4Q6B9Z1 124 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 LINC00322Q6ZN03 302 aaPredicted RBP4.75□□□□□ -1.65
NCL-209ENST00000484328 FOXI2Q6ZQN5 318 aa4.75□□□□□ -1.65
NCL-209ENST00000484328 TRPT1Q86TN4 253 aaKnown RBP4.75□□□□□ -1.65
NCL-209ENST00000484328 WFDC3Q8IUB2 231 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms