RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 KLF5Q13887 457 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-207ENST00000483888 PVRIGQ6DKI7 326 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 ZNF501Q96CX3 271 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-207ENST00000483888 DSCR8Q96T75 97 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 WIPF3A6NGB9 483 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 SLC50A1Q9BRV3 221 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 CISD3P0C7P0 127 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 FOXG1P55316 489 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-207ENST00000483888 FAM57AQ8TBR7 257 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 DUTP33316 252 aaKnown RBP8.43□□□□□ -1.06
COL12A1-207ENST00000483888 TMEM190Q8WZ59 177 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 SPTA1P02549 2419 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 PRR33A8MZF0 331 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-207ENST00000483888 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 RBX1P62877 108 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 PRCDQ00LT1 54 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 C16orf54Q6UWD8 224 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 PCP2Q8IVA1 136 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 INS-IGF2F8WCM5 200 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 INSP01308 110 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 SRXN1Q9BYN0 137 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 IGKV1-9A0A0C4DH69 117 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 DPH3P1Q9H4G8 78 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 IGLL5B9A064 214 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 Q6ZUT4 128 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 NTF4P34130 210 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 TM4SF5O14894 197 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 IFI6P09912 130 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 LINC00271P0C7V0 271 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 PRIMA1Q86XR5 153 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 IMMP1LQ96LU5 166 aa8.42□□□□□ -1.06
COL12A1-207ENST00000483888 THADAQ6YHU6 1953 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 VWA8A3KMH1 1905 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 LINC01587Q99440 93 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 SRSF7Q16629 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
COL12A1-207ENST00000483888 CLEC19AQ6UXS0 136 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 SPATA25Q9BR10 227 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
COL12A1-207ENST00000483888 DKK2Q9UBU2 259 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 LYZL4Q96KX0 146 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 HAX1O00165 279 aa8.41□□□□□ -1.06
COL12A1-207ENST00000483888 C9orf172C9J069 976 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 DCTN5Q9BTE1 182 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 MRPL35Q9NZE8 188 aaKnown RBP8.4□□□□□ -1.06
COL12A1-207ENST00000483888 A0A0B4J2C4 111 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 IGHG3P01860 377 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 RNASE2P10153 161 aaKnown RBP8.4□□□□□ -1.06
COL12A1-207ENST00000483888 LINC00114Q6XXX2 140 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 AHRRA9YTQ3 701 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 PTH2Q96A98 100 aa8.4□□□□□ -1.06
COL12A1-207ENST00000483888 RPL15P61313 204 aaKnown RBP8.4□□□□□ -1.06
COL12A1-207ENST00000483888 IGKV1-5P01602 117 aa8.4□□□□□ -1.07
COL12A1-207ENST00000483888 TRGV3P03979 118 aa8.4□□□□□ -1.07
COL12A1-207ENST00000483888 IL17RELQ6ZVW7 336 aa8.4□□□□□ -1.07
COL12A1-207ENST00000483888 EGR2P11161 476 aaPredicted RBP8.4□□□□□ -1.07
COL12A1-207ENST00000483888 ZNF876PQ49A33 203 aa8.4□□□□□ -1.07
COL12A1-207ENST00000483888 IGKV3D-7A0A0C4DH55 119 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 RPL32P62910 135 aaKnown RBP8.39□□□□□ -1.07
COL12A1-207ENST00000483888 C14orf178Q8N769 122 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-207ENST00000483888 PRB2P02812 416 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-207ENST00000483888 TMEM213A2RRL7 107 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 MRPL51Q4U2R6 128 aaKnown RBP8.39□□□□□ -1.07
COL12A1-207ENST00000483888 MT-ATP8P03928 68 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 TTTY12Q9BZ98 90 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 NDUFS7O75251 213 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 FAM104BQ5XKR9 115 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 F8VRH5 84 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 BAALC-AS2P0C853 105 aa8.39□□□□□ -1.07
COL12A1-207ENST00000483888 IGHV3-73A0A0B4J1V6 119 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 SPACA3Q8IXA5 215 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 Q8TAT8 98 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 Q8N8P6 123 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 FDCSPQ8NFU4 85 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 TP53TG1Q9Y2A0 90 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 NBL1P41271 181 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 Q86TA4 180 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 LY6G5BQ8NDX9 201 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 ANAPC10Q9UM13 185 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 ATP5G1P05496 136 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
COL12A1-207ENST00000483888 TRGV2A0A075B6R0 118 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 C15orf62A8K5M9 175 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 USF3Q68DE3 2245 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 NUPR1O60356 82 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 HOXD3P31249 432 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-207ENST00000483888 ERCC8Q13216 396 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
COL12A1-207ENST00000483888 TRGV9Q99603 122 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 TMEM133Q9H2Q1 129 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 K7EMI3 77 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms