RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 FAM24BQ8N5W8 94 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.19□□□□□ -1.74
COL17A1-206ENST00000483876 C5orf17Q8NAS9 161 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 OR4F17Q8NGA8 305 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ISOC2Q96AB3 205 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ELOVL1Q9BW60 279 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 BIN3Q9NQY0 253 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 CLEC5AQ9NY25 188 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 RABAC1Q9UI14 185 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 VPREB3Q9UKI3 123 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 U3KQE9 123 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 TRBV20OR9-2A0A075B6H5 130 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 SERTM2A0A1B0GWG4 89 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 OR2T8A6NH00 312 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 NDUFA4O00483 81 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 PEX7O00628 323 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 BUB3O43684 328 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 IGHV4-59P01825 116 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 IGHG4P01861 327 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 TRGV3P03979 118 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 TCRAP04437 139 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 S100PP25815 95 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 AKR1C3P42330 323 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 GNG4P50150 75 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 CNN1P51911 297 aaKnown RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 RANP62826 216 aaKnown RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 PSG9Q00887 426 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 FLI1Q01543 452 aaPredicted RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 KIAA0141Q14154 515 aaPredicted RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 USF2Q15853 346 aaPredicted RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 LY6EQ16553 131 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 KCNIP4Q6PIL6 250 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 TOMM20LQ6UXN7 152 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 FAM231DQ6ZW35 169 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 BCL6BQ8N143 479 aaPredicted RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 Q8N2B8 174 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 SFRP2Q96HF1 295 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 FMC1Q96HJ9 113 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 CCDC140Q96MF4 163 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 OR5B12Q96R08 314 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 JMJD8Q96S16 334 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 ATG101Q9BSB4 218 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 CHRDL1Q9BU40 450 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 DERL1Q9BUN8 251 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 PRSS22Q9GZN4 317 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 OSTCQ9NRP0 149 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF586Q9NXT0 402 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 SOX21Q9Y651 276 aaPredicted RBP4.18□□□□□ -1.74
COL17A1-206ENST00000483876 NOTCH3Q9UM47 2321 aa4.18□□□□□ -1.74
COL17A1-206ENST00000483876 A0A087X0K7 114 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 C1orf196B1AJZ1 125 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 K7EMT4 169 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 K7EQM0 130 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 GGCTO75223 188 aaKnown RBP4.17□□□□□ -1.74
COL17A1-206ENST00000483876 IGLV2-8P01709 118 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 TYMSP04818 313 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 SLC25A5P05141 298 aaKnown RBP4.17□□□□□ -1.74
COL17A1-206ENST00000483876 ELANEP08246 267 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 ATF4P18848 351 aaPredicted RBP4.17□□□□□ -1.74
COL17A1-206ENST00000483876 PSMB8P28062 276 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 GPR183P32249 361 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 RAB5BP61020 215 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 RPL19P84098 196 aaKnown RBP4.17□□□□□ -1.74
COL17A1-206ENST00000483876 SCGB2A2Q13296 93 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 BEAN1Q3B7T3 259 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 C9orf152Q5JTZ5 239 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 TEX38Q6PEX7 206 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 CLEC19AQ6UXS0 136 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 COX8CQ7Z4L0 72 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 BAGE2Q86Y30 109 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 OR8I2Q8N0Y5 310 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 RNF152Q8N8N0 203 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 CMTM2Q8TAZ6 248 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 FAM210BQ96KR6 192 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 IGF2BP2-AS1Q96M15 143 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 MS4A10Q96PG2 267 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 METTL26Q96S19 204 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 MLST8Q9BVC4 326 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 NPFFR1Q9GZQ6 430 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 Q9H3A6 140 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 ZFAND3Q9H8U3 227 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 MLXQ9UH92 298 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 ZFP30Q9Y2G7 519 aa4.17□□□□□ -1.74
COL17A1-206ENST00000483876 TMA7Q9Y2S6 64 aaKnown RBP4.17□□□□□ -1.74
COL17A1-206ENST00000483876 COL7A1Q02388 2944 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 LCE6AA0A183 80 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 LOC105371267A0A1B0GV96 52 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 MDFIC2A0A1B0GVS7 189 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 A0A1W2PS18 150 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 CLPSL1A2RUU4 121 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 SH2D7A6NKC9 451 aaPredicted RBP4.16□□□□□ -1.74
COL17A1-206ENST00000483876 C3orf84H3BNL1 204 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 M0QZ24 198 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 LTAP01374 205 aa4.16□□□□□ -1.74
COL17A1-206ENST00000483876 ARL3P36405 182 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms