RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
ATG4B-221ENST00000483778 RHOBP62745 196 aa12.66□□□□□ -0.38
ATG4B-221ENST00000483778 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
ATG4B-221ENST00000483778 TRIQKQ629K1 86 aa12.66□□□□□ -0.38
ATG4B-221ENST00000483778 DYNC1H1Q14204 4646 aaKnown RBP12.66□□□□□ -0.38
ATG4B-221ENST00000483778 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 H3BTX0 84 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 K7EPK0 472 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-221ENST00000483778 HTN1P15515 57 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 INPP1P49441 399 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 SELENOTP62341 195 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 LINC01587Q99440 93 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 PARD6GQ9BYG4 376 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-221ENST00000483778 ARV1Q9H2C2 271 aa12.65□□□□□ -0.38
ATG4B-221ENST00000483778 C7orf66A4D0T2 115 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 LYRM9A8MSI8 78 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 CCSO14618 274 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 AGPAT2O15120 278 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 PLA2G10O15496 165 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 TSPOP30536 169 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 TEPPQ6URK8 271 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 OR10P1Q8NGE3 313 aa12.64□□□□□ -0.39
ATG4B-221ENST00000483778 RPUSD4Q96CM3 377 aaKnown RBP12.64□□□□□ -0.39
ATG4B-221ENST00000483778 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 F5H768 121 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 S100A7P31151 101 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 ZNF575Q86XF7 245 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 LRRC20Q8TCA0 184 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 TMEM37Q8WXS4 190 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 MGST2Q99735 147 aa12.63□□□□□ -0.39
ATG4B-221ENST00000483778 ZNF701M0R085 212 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-221ENST00000483778 SLC17A3O00476 420 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 GOSR2O14653 212 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 TSC22D2O75157 780 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 MED14OSP0DP75 135 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 IL7P13232 177 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 TAS2R30P59541 319 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 LINC00305Q7Z4B0 112 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 ZNF331Q9NQX6 463 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-221ENST00000483778 MGAT4CQ9UBM8 478 aa12.62□□□□□ -0.39
ATG4B-221ENST00000483778 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
ATG4B-221ENST00000483778 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
ATG4B-221ENST00000483778 H3BQ15 152 aa12.61□□□□□ -0.39
ATG4B-221ENST00000483778 B2MP61769 119 aa12.61□□□□□ -0.39
ATG4B-221ENST00000483778 C1orf134Q5TEV5 83 aa12.61□□□□□ -0.39
ATG4B-221ENST00000483778 PPP1R14DQ9NXH3 145 aa12.61□□□□□ -0.39
ATG4B-221ENST00000483778 NUDT3O95989 172 aa12.6□□□□□ -0.39
ATG4B-221ENST00000483778 TAS2R60P59551 318 aa12.6□□□□□ -0.39
ATG4B-221ENST00000483778 OPCMLQ14982 345 aa12.6□□□□□ -0.39
ATG4B-221ENST00000483778 C15orf53Q8NAA6 179 aa12.6□□□□□ -0.39
ATG4B-221ENST00000483778 KRTAP4-5Q9BYR2 181 aa12.6□□□□□ -0.39
ATG4B-221ENST00000483778 C11orf1Q9H5F2 150 aa12.6□□□□□ -0.39
ATG4B-221ENST00000483778 NOP10Q9NPE3 64 aaKnown RBP12.6□□□□□ -0.39
ATG4B-221ENST00000483778 CBY3A6NI87 242 aa12.59□□□□□ -0.39
ATG4B-221ENST00000483778 TMEM256Q8N2U0 113 aa12.59□□□□□ -0.39
ATG4B-221ENST00000483778 ZNRF2Q8NHG8 242 aa12.59□□□□□ -0.39
ATG4B-221ENST00000483778 SAT2Q96F10 170 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-221ENST00000483778 SEC22CQ9BRL7 303 aa12.59□□□□□ -0.39
ATG4B-221ENST00000483778 FAM24AA6NFZ4 105 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 CENPXA8MT69 81 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 CST7O76096 145 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 ATP5G1P05496 136 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 CDKN1BP46527 198 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 ATP5G3P48201 142 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 TNP2Q05952 138 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 PXDC1Q5TGL8 231 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 MIC13Q5XKP0 118 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 ZNF546Q86UE3 836 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 RNASE8Q8TDE3 154 aaKnown RBP12.58□□□□□ -0.4
ATG4B-221ENST00000483778 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 ATG101Q9BSB4 218 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 C20orf85Q9H1P6 137 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 LINC00588Q9Y4M8 146 aa12.58□□□□□ -0.4
ATG4B-221ENST00000483778 LSM5Q9Y4Y9 91 aaKnown RBP12.58□□□□□ -0.4
ATG4B-221ENST00000483778 TIMM8BQ9Y5J9 83 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-221ENST00000483778 TRAV6A0A075B6T7 132 aa12.57□□□□□ -0.4
ATG4B-221ENST00000483778 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
ATG4B-221ENST00000483778 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
ATG4B-221ENST00000483778 C10orf113Q5VZT2 155 aa12.57□□□□□ -0.4
ATG4B-221ENST00000483778 LCN15Q6UWW0 184 aa12.57□□□□□ -0.4
ATG4B-221ENST00000483778 GGACTQ9BVM4 153 aa12.57□□□□□ -0.4
ATG4B-221ENST00000483778 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 J3KRW8 73 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 TCRBP04435 133 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 CT45A10P0DMU9 189 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 NRARPQ7Z6K4 114 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 BPIFA4PQ86YQ2 179 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 C16orf74Q96GX8 76 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 DNAJC4Q9NNZ3 241 aa12.56□□□□□ -0.4
ATG4B-221ENST00000483778 NBDYA0A0U1RRE5 68 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 L7N2F9 121 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 LYRM1O43325 122 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 CXCL2P19875 107 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 CAMLGP49069 296 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 BCAP31P51572 246 aa12.55□□□□□ -0.4
ATG4B-221ENST00000483778 FAM3BP58499 235 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-221ENST00000483778 VAMP2P63027 116 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms