RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
CPNE1-224ENST00000483359 TMED6Q8WW62 240 aa13.26□□□□□ -0.29
CPNE1-224ENST00000483359 A0A087X0K7 114 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 SLC17A3O00476 420 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-224ENST00000483359 MEOX2P50222 304 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 EIF5AP63241 154 aaKnown RBP13.25□□□□□ -0.29
CPNE1-224ENST00000483359 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 STOML3Q8TAV4 291 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 OR51M1Q9H341 326 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 SRD5A3Q9H8P0 318 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 TAS2R45P59539 299 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 DEFB1P60022 68 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 KHDC3LQ587J8 217 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 SSX7Q7RTT5 188 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 ZNF503Q96F45 646 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 PAXXQ9BUH6 204 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 HRH4Q9H3N8 390 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 TUBA4BQ9H853 241 aa13.25□□□□□ -0.29
CPNE1-224ENST00000483359 ID1P41134 155 aa13.24□□□□□ -0.29
CPNE1-224ENST00000483359 UBE2L3P68036 154 aaKnown RBP13.24□□□□□ -0.29
CPNE1-224ENST00000483359 SLC51BQ86UW2 128 aa13.24□□□□□ -0.29
CPNE1-224ENST00000483359 RAB24Q969Q5 203 aa13.24□□□□□ -0.29
CPNE1-224ENST00000483359 TMEM14CQ9P0S9 112 aa13.24□□□□□ -0.29
CPNE1-224ENST00000483359 PRKDCP78527 4128 aaKnown RBP13.24□□□□□ -0.29
CPNE1-224ENST00000483359 TRAV8-2A0A0B4J237 113 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 ISLRO14498 428 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 C4BPBP20851 252 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 HLA-DMBP28068 263 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 PSMB3P49720 205 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 FHITP49789 147 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 LCN15Q6UWW0 184 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 C20orf173Q96LM9 149 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
CPNE1-224ENST00000483359 ACTR3CQ9C0K3 210 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-224ENST00000483359 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
CPNE1-224ENST00000483359 HIST1H1EP10412 219 aaKnown RBP13.22□□□□□ -0.29
CPNE1-224ENST00000483359 ZNF726P1Q15940 193 aa13.22□□□□□ -0.29
CPNE1-224ENST00000483359 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
CPNE1-224ENST00000483359 FXYD5Q96DB9 178 aa13.22□□□□□ -0.29
CPNE1-224ENST00000483359 TRBV19A0A075B6N1 114 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 FRMD6-AS1P0C7T7 363 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 SAMD13Q5VXD3 122 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-224ENST00000483359 CMC4P56277 68 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-224ENST00000483359 ACTL10Q5JWF8 245 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 IQCF2Q8IXL9 164 aa13.21□□□□□ -0.29
CPNE1-224ENST00000483359 SAT2Q96F10 170 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-224ENST00000483359 F6UB75 175 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 NBEAP1P0C6P0 100 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 STAG3L2P0CL84 134 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 GUK1Q16774 197 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 FAM213BQ8TBF2 198 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 PHYHIPLQ96FC7 376 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 SLC50A1Q9BRV3 221 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 CTXND1A0A1B0GTU2 59 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 NDUFB4O95168 129 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
CPNE1-224ENST00000483359 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-224ENST00000483359 GDF5OSQ5U4N7 250 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 PQLC2Q6ZP29 291 aa13.2□□□□□ -0.3
CPNE1-224ENST00000483359 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
CPNE1-224ENST00000483359 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
CPNE1-224ENST00000483359 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
CPNE1-224ENST00000483359 FAM74A1Q5RGS3 127 aa13.19□□□□□ -0.3
CPNE1-224ENST00000483359 EXOC3-AS1Q8N2X6 119 aa13.19□□□□□ -0.3
CPNE1-224ENST00000483359 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
CPNE1-224ENST00000483359 UMAD1C9J7I0 102 aa13.18□□□□□ -0.3
CPNE1-224ENST00000483359 EIF5AL1Q6IS14 154 aaKnown RBP13.18□□□□□ -0.3
CPNE1-224ENST00000483359 A0A1B0GV50 99 aa13.18□□□□□ -0.3
CPNE1-224ENST00000483359 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-224ENST00000483359 STHQ8IWL8 128 aa13.18□□□□□ -0.3
CPNE1-224ENST00000483359 AGRNO00468 2067 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 CXorf1O96002 111 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-224ENST00000483359 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-224ENST00000483359 RANP62826 216 aaKnown RBP13.17□□□□□ -0.3
CPNE1-224ENST00000483359 PDE6HQ13956 83 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 PSG3Q16557 428 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 ALKAL2Q6UX46 152 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 ASCL2Q99929 193 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
CPNE1-224ENST00000483359 A8MZ25 164 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 M0R3E3 92 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 GCHFRP30047 84 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 LOC102724200A0A096LPH7 203 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-224ENST00000483359 ZNF253O75346 499 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 PSG9Q00887 426 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 ICAM4Q14773 271 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 RPUSD4Q96CM3 377 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms