RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 AMMECR1LQ6DCA0 310 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 TMEM251Q8N6I4 163 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 GATSQ8NAP1 163 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 OR11L1Q8NGX0 322 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 OR9G1Q8NH87 305 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 OR1F12Q8NHA8 337 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 C18orf32Q8TCD1 76 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 C7orf33Q8WU49 177 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 TSKUQ8WUA8 353 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 ADTRPQ96IZ2 230 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 CITED1Q99966 193 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 SLC25A22Q9H936 323 aa3.84□□□□□ -1.79
USP40-213ENST00000483216 MRPL16Q9NX20 251 aaKnown RBP3.84□□□□□ -1.79
USP40-213ENST00000483216 MUC3AQ02505 3323 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 hADV38S2A0JD32 116 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 GRIFINA4D1Z8 144 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 TAX1BP3O14907 124 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 DUX1O43812 170 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 MPZL1O95297 269 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 SMIM13P0DJ93 91 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 COX8AP10176 69 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 NTF3P20783 257 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 GPR6P46095 362 aaPredicted RBP3.83□□□□□ -1.8
USP40-213ENST00000483216 CYB561P49447 251 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 ZNF83P51522 516 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 RPL31P62899 125 aaKnown RBP3.83□□□□□ -1.8
USP40-213ENST00000483216 HBBP68871 147 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 ARG2P78540 354 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 TAL2Q16559 108 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 CEACAM21Q3KPI0 293 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 TSPO2Q5TGU0 170 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 UNQ5815/PRO19632Q6UWF5 114 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 NEGR1Q7Z3B1 354 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 LHFPL4Q7Z7J7 247 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 OR1L4Q8NGR5 311 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 CCL4L1Q8NHW4 92 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 ZNF721Q8TF20 911 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 RDH5Q92781 318 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 TMEM54Q969K7 222 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 GALMQ96C23 342 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 SPACA5Q96QH8 159 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 NDFIP1Q9BT67 221 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 DERL1Q9BUN8 251 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 OR2D2Q9H210 308 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 METTL7AQ9H8H3 244 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 MMP17Q9ULZ9 603 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 CYSLTR1Q9Y271 337 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 BRWD1Q9NSI6 2320 aa3.83□□□□□ -1.8
USP40-213ENST00000483216 C5orf42Q9H799 3197 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 TRIOO75962 3097 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 IGKV3D-11A0A0A0MRZ8 115 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 ODAMA1E959 279 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 C10orf142B7Z368 130 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 EFNA2O43921 213 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 TMEM50AO95807 157 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 PSG2P11465 335 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 HLA-DRB4P13762 266 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 GABRG2P18507 467 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 GCHFRP30047 84 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 CKS1BP61024 79 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 GNG3P63215 75 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 PSG9Q00887 426 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 NNATQ16517 81 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 MPV17L2Q567V2 206 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 Q56UQ5 140 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 TMEM136Q6ZRR5 245 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 Q6ZSR6 202 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 OR8I2Q8N0Y5 310 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 C5orf17Q8NAS9 161 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 OR4A5Q8NH83 315 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 PIFOQ8TCI5 191 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 SLC25A2Q9BXI2 301 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 CCL28Q9NRJ3 127 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 MED29Q9NX70 200 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 HIGD1BQ9P298 99 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 HLA-DRB4X5D2U9 266 aa3.82□□□□□ -1.8
USP40-213ENST00000483216 IGKV1D-8A0A087WSZ0 117 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.81□□□□□ -1.8
USP40-213ENST00000483216 A0A0G2JLM5 398 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 A0A1B0GX78 115 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 TMEM30CPA0ZSE6 113 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 LINC01549A6NIU2 74 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 H3BP45 60 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 K7EQM0 130 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 IGLV3-19P01714 112 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 IGHV4-34P06331 123 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 IAPPP10997 89 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 G6PCP35575 357 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 DSCR4P56555 118 aaPredicted RBP3.81□□□□□ -1.8
USP40-213ENST00000483216 GABRA6Q16445 453 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 RNASEKQ6P5S7 137 aaKnown RBP3.81□□□□□ -1.8
USP40-213ENST00000483216 MRPL21Q7Z2W9 205 aaKnown RBP3.81□□□□□ -1.8
USP40-213ENST00000483216 Q8N9L7 120 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 OR2M3Q8NG83 312 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 ZNF502Q8TBZ5 544 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 SLC37A2Q8TED4 501 aa3.81□□□□□ -1.8
USP40-213ENST00000483216 CACNG8Q8WXS5 425 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms