RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 ZNF747Q9BV97 191 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 RHPN1-AS1Q9BWJ2 59 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 MANBALQ9NQG1 85 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 RNF24Q9Y225 148 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 ANK2Q01484 3957 aa6.24□□□□□ -1.41
USP4-210ENST00000483212 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 A0A1W2PS18 150 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 H3BTX0 84 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 SOCS3O14543 225 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 ZNF253O75346 499 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 NBEAP1P0C6P0 100 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 ATP5G3P48201 142 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 CD81P60033 236 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 UBE2G2P60604 165 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 UQCC3Q6UW78 93 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 SIGLEC15Q6ZMC9 328 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 LURAP1LQ8IV03 231 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 IQCF2Q8IXL9 164 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 LINC00482Q8N8I6 264 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 SPATA3Q8NHX4 192 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 TMEM231Q9H6L2 316 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 SIGLEC8Q9NYZ4 499 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 MLXQ9UH92 298 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 VAX2Q9UIW0 290 aa6.23□□□□□ -1.41
USP4-210ENST00000483212 TRAV8-2A0A0B4J237 113 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 OVOL1O14753 267 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 NDUFS6O75380 124 aaKnown RBP6.22□□□□□ -1.41
USP4-210ENST00000483212 IFNA1P01562 189 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 SRP19P09132 144 aaKnown RBP6.22□□□□□ -1.41
USP4-210ENST00000483212 TAGLN2P37802 199 aaKnown RBP6.22□□□□□ -1.41
USP4-210ENST00000483212 GALR1P47211 349 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 MEF2BQ02080 365 aaPredicted RBP6.22□□□□□ -1.41
USP4-210ENST00000483212 PDE6HQ13956 83 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 OR4F17Q8NGA8 305 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 RXFP4Q8TDU9 374 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 BLNKQ8WV28 456 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 TMEM158Q8WZ71 300 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 NARS2Q96I59 477 aaKnown RBP6.22□□□□□ -1.41
USP4-210ENST00000483212 OR4F4Q96R69 305 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 ELOVL1Q9BW60 279 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 ZNF331Q9NQX6 463 aaPredicted RBP6.22□□□□□ -1.41
USP4-210ENST00000483212 PEMTQ9UBM1 199 aa6.22□□□□□ -1.41
USP4-210ENST00000483212 DNHD1Q96M86 4753 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 C11orf94C9JXX5 98 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 PEA15Q15121 130 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 TCF24Q7RTU0 167 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 LYPD1Q8N2G4 141 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 C11orf52Q96A22 123 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 TXNDC17Q9BRA2 123 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 EIF5A2Q9GZV4 153 aaKnown RBP6.21□□□□□ -1.42
USP4-210ENST00000483212 Q9H3A6 140 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 SMDT1Q9H4I9 107 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 SELENOKQ9Y6D0 94 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 VWFP04275 2813 aa6.21□□□□□ -1.42
USP4-210ENST00000483212 HELTA6NFD8 242 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 ZNF785A8K8V0 405 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 ADCYAP1P18509 176 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 ATF4P18848 351 aaPredicted RBP6.2□□□□□ -1.42
USP4-210ENST00000483212 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 BMI1P35226 326 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 MEOX2P50222 304 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 RANP62826 216 aaKnown RBP6.2□□□□□ -1.42
USP4-210ENST00000483212 DEFB114Q30KQ6 69 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 CST9LP1Q5W188 147 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 SHISA2Q6UWI4 295 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 EXOC3-AS1Q8N2X6 119 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 NRN1Q9NPD7 142 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 OTORQ9NRC9 128 aa6.2□□□□□ -1.42
USP4-210ENST00000483212 SCO2A0A1W2PP80 73 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 TMEM218A2RU14 115 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 PGPA6NDG6 321 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 TMEM250H0YL14 139 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 K7EQG2 157 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 M0QZ24 198 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 M0R3E3 92 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 PF4P02776 101 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
USP4-210ENST00000483212 GNG5P63218 68 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 PSG9Q00887 426 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 IGFL4Q6B9Z1 124 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 C12orf54Q6X4T0 127 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 TMEM61Q8N0U2 210 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 C2CD4CQ8TF44 421 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 C20orf173Q96LM9 149 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 CITED4Q96RK1 184 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 SLC50A1Q9BRV3 221 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 NKX6-2Q9C056 277 aaPredicted RBP6.19□□□□□ -1.42
USP4-210ENST00000483212 SLC35B3Q9H1N7 401 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 TREM1Q9NP99 234 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 COL6A5A8TX70 2615 aa6.19□□□□□ -1.42
USP4-210ENST00000483212 WNK1Q9H4A3 2382 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 STAB1Q9NY15 2570 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 TRAV2A0A0B4J234 112 aa6.18□□□□□ -1.42
USP4-210ENST00000483212 IZUMO1RA6ND01 250 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms