RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MUC15Q8N387 334 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 TMEM14CQ9P0S9 112 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 USP9YO00507 2555 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-220ENST00000482507 CELSR2Q9HCU4 2923 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 TRAV9-2A0A087WT02 112 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 TSPOP30536 169 aa11.74□□□□□ -0.53
ATG4B-220ENST00000482507 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
ATG4B-220ENST00000482507 IGHV1-24A0A0C4DH33 117 aa11.73□□□□□ -0.53
ATG4B-220ENST00000482507 TIMM23O14925 209 aa11.73□□□□□ -0.53
ATG4B-220ENST00000482507 C16orf54Q6UWD8 224 aa11.73□□□□□ -0.53
ATG4B-220ENST00000482507 BCL6BQ8N143 479 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-220ENST00000482507 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
ATG4B-220ENST00000482507 GFRA4Q9GZZ7 299 aa11.73□□□□□ -0.53
ATG4B-220ENST00000482507 LY6HO94772 140 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 COL8A1P27658 744 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 ZNF138P52744 262 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 PLGLAQ15195 96 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 KLHDC1Q8N7A1 406 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 ZC2HC1AQ96GY0 325 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 S4R3C0 116 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 NBPF19A0A087WUL8 3843 aa11.72□□□□□ -0.53
ATG4B-220ENST00000482507 LOC102724200A0A096LPH7 203 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-220ENST00000482507 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-220ENST00000482507 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-220ENST00000482507 MAP1AP78559 2803 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-220ENST00000482507 TRBV19A0A075B6N1 114 aa11.71□□□□□ -0.53
ATG4B-220ENST00000482507 Q6ZVH6 145 aa11.71□□□□□ -0.53
ATG4B-220ENST00000482507 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.53
ATG4B-220ENST00000482507 TMEM70Q9BUB7 260 aa11.71□□□□□ -0.53
ATG4B-220ENST00000482507 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.53
ATG4B-220ENST00000482507 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.54
ATG4B-220ENST00000482507 ZFP30Q9Y2G7 519 aa11.71□□□□□ -0.54
ATG4B-220ENST00000482507 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.54
ATG4B-220ENST00000482507 H3BRN7 92 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 CNIH1O95406 144 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 SIGLEC15Q6ZMC9 328 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 HAX1O00165 279 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 CRIP1P50238 77 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 ZNF491Q8N8L2 437 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 UBTD1Q9HAC8 227 aa11.7□□□□□ -0.54
ATG4B-220ENST00000482507 CHEK1O14757 476 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
ATG4B-220ENST00000482507 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-220ENST00000482507 ARMS2P0C7Q2 107 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 LINC00614P0C842 121 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 CHCHD1Q96BP2 118 aaKnown RBP11.69□□□□□ -0.54
ATG4B-220ENST00000482507 NDFIP1Q9BT67 221 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 MRPS16Q9Y3D3 137 aaKnown RBP11.69□□□□□ -0.54
ATG4B-220ENST00000482507 HILPDAQ9Y5L2 63 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 SYS1-DBNDD2H3BUS1 97 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 M0R3E3 92 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 CFHR4Q92496 578 aa11.69□□□□□ -0.54
ATG4B-220ENST00000482507 MCRIP2Q9BUT9 160 aaKnown RBP11.69□□□□□ -0.54
ATG4B-220ENST00000482507 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 IL4P05112 153 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 ARF6P62330 175 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 KLRD1Q13241 179 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 RNF5Q99942 180 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 TRBV6-1A0A0K0K1D8 114 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 RNF125Q96EQ8 232 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 FBN2P35556 2912 aa11.68□□□□□ -0.54
ATG4B-220ENST00000482507 POLQO75417 2590 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 UNQ5815/PRO19632Q6UWF5 114 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 TMEM75Q8N9X5 138 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 TMUB1Q9BVT8 246 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 FASNP49327 2511 aaKnown RBP11.67□□□□□ -0.54
ATG4B-220ENST00000482507 A0A1W2PRD5 423 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 A0A1W2PRF3 423 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 A0A1W2PRM7 423 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 NBR2O15453 112 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 CSN3P07498 182 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 FCGR2BP31994 310 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-220ENST00000482507 C1RLQ9NZP8 487 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
ATG4B-220ENST00000482507 GCN1Q92616 2671 aaKnown RBP11.67□□□□□ -0.54
ATG4B-220ENST00000482507 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
ATG4B-220ENST00000482507 C20orf202A1L168 122 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 J3QKU1 62 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 NDUFS7O75251 213 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 LIPFP07098 398 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 FAM162BQ5T6X4 162 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 SVIPQ8NHG7 77 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 SRSF8Q9BRL6 282 aaKnown RBP11.66□□□□□ -0.54
ATG4B-220ENST00000482507 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
ATG4B-220ENST00000482507 F8W735 103 aaPredicted RBP11.66□□□□□ -0.54
ATG4B-220ENST00000482507 HTR1DP28221 377 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms