RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FAM213BQ8TBF2 198 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 RAB24Q969Q5 203 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 FAM167A-AS1Q96KT0 104 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 C16orf92Q96LL3 132 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 ACTR3CQ9C0K3 210 aaPredicted RBP9.88□□□□□ -0.83
HDAC1-208ENST00000482310 OR51M1Q9H341 326 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 ZMAT5Q9UDW3 170 aaKnown RBP9.88□□□□□ -0.83
HDAC1-208ENST00000482310 RNF24Q9Y225 148 aa9.88□□□□□ -0.83
HDAC1-208ENST00000482310 SLC17A3O00476 420 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 SEC11BP0C7V7 166 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 HLA-DMBP28068 263 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 TAS2R45P59539 299 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 DEFB131AP59861 70 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 DEFB1P60022 68 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 ZNF726P1Q15940 193 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 LCN15Q6UWW0 184 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 ALKAL2Q6UX46 152 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 DEFB125Q8N687 156 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 ZNF586Q9NXT0 402 aa9.87□□□□□ -0.83
HDAC1-208ENST00000482310 A0A087X0K7 114 aa9.86□□□□□ -0.83
HDAC1-208ENST00000482310 OR11H12B2RN74 326 aa9.86□□□□□ -0.83
HDAC1-208ENST00000482310 IGLC2P0DOY2 106 aa9.86□□□□□ -0.83
HDAC1-208ENST00000482310 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
HDAC1-208ENST00000482310 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
HDAC1-208ENST00000482310 CTXND1A0A1B0GTU2 59 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 MAP1LC3B2A6NCE7 125 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 KNCNA6PVL3 124 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 K7EIL1 84 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 SOCS3O14543 225 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 ID1P41134 155 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 MEOX2P50222 304 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 SNRPD3P62318 126 aaKnown RBP9.85□□□□□ -0.83
HDAC1-208ENST00000482310 DEFB121Q5J5C9 76 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 EIF5AL1Q6IS14 154 aaKnown RBP9.85□□□□□ -0.83
HDAC1-208ENST00000482310 RNF141Q8WVD5 230 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 PHYHIPLQ96FC7 376 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 MAP1LC3BQ9GZQ8 125 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 SRD5A3Q9H8P0 318 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 TMEM14CQ9P0S9 112 aa9.85□□□□□ -0.83
HDAC1-208ENST00000482310 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 TRAV8-2A0A0B4J237 113 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 STAG3L2P0CL84 134 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 STAG3L3P0CL85 134 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 HIST1H1EP10412 219 aaKnown RBP9.84□□□□□ -0.83
HDAC1-208ENST00000482310 GCHFRP30047 84 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 PSMB3P49720 205 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 Q8N1Y9 231 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 ZNF738Q8NE65 137 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 HRH4Q9H3N8 390 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 TMPRSS5Q9H3S3 457 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 TUBA4BQ9H853 241 aa9.84□□□□□ -0.83
HDAC1-208ENST00000482310 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 F6UB75 175 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 ISLRO14498 428 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 CXorf1O96002 111 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 NBEAP1P0C6P0 100 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
HDAC1-208ENST00000482310 PQLC2Q6ZP29 291 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 EXOC3-AS1Q8N2X6 119 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 CITED4Q96RK1 184 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
HDAC1-208ENST00000482310 ZNF705FA8MVS1 300 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-208ENST00000482310 NDUFB4O95168 129 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 IGKV3-20P01619 116 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 ZNF705DP0CH99 300 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-208ENST00000482310 ZNF705BP0CI00 300 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-208ENST00000482310 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 SULT1A2P50226 295 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 UBE2G2P60604 165 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 RANP62826 216 aaKnown RBP9.82□□□□□ -0.84
HDAC1-208ENST00000482310 ACTL10Q5JWF8 245 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 ZNF331Q9NQX6 463 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-208ENST00000482310 RPH3ALQ9UNE2 315 aa9.82□□□□□ -0.84
HDAC1-208ENST00000482310 ZNF705EA8MWA4 302 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-208ENST00000482310 ICAM4Q14773 271 aa9.81□□□□□ -0.84
HDAC1-208ENST00000482310 GUK1Q16774 197 aa9.81□□□□□ -0.84
HDAC1-208ENST00000482310 GDF5OSQ5U4N7 250 aa9.81□□□□□ -0.84
HDAC1-208ENST00000482310 SAT2Q96F10 170 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-208ENST00000482310 Q9H3A6 140 aa9.81□□□□□ -0.84
HDAC1-208ENST00000482310 M0R3E3 92 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 PSG9Q00887 426 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 PSG3Q16557 428 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 SAMD13Q5VXD3 122 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 STHQ8IWL8 128 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 PCNPQ8WW12 178 aaKnown RBP9.8□□□□□ -0.84
HDAC1-208ENST00000482310 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
HDAC1-208ENST00000482310 FRMD6-AS1P0C7T7 363 aa9.79□□□□□ -0.84
HDAC1-208ENST00000482310 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-208ENST00000482310 HIST1H1AQ02539 215 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms