RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 QRFPP83859 136 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 RGS21Q2M5E4 152 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 LIN52Q52LA3 116 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 LRRC18Q8N456 261 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 OR10X1Q8NGY0 326 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 DGCR14Q96DF8 476 aaKnown RBP-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 C9orf16Q9BUW7 83 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 PARVGQ9HBI0 331 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 ASB4Q9Y574 426 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 COL7A1Q02388 2944 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 HEATR1Q9H583 2144 aaKnown RBP-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 KCPQ6ZWJ8 1503 aa-0.13□□□□□ -2.43
KDM1A-204ENST00000481879 CASP8AP2Q9UKL3 1982 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 PLB1Q6P1J6 1458 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 TPRP12270 2363 aaKnown RBP-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 A0A096LPI6 279 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 hDV103S1A0JD37 113 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 BANF1O75531 89 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 MIR22HGQ0VDD5 57 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 CASC2Q6XLA1 102 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 PRR15Q8IV56 129 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 HSPB8Q9UJY1 196 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 BOKQ9UMX3 212 aaPredicted RBP-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 PCLOQ9Y6V0 5065 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 FREM3P0C091 2139 aa-0.14□□□□□ -2.43
KDM1A-204ENST00000481879 DENND4CQ5VZ89 1909 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 TAF1LQ8IZX4 1826 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 ZNF106Q9H2Y7 1883 aaKnown RBP-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 DUXBA0A1W2PPF3 345 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 K7ERJ3 54 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 RER1O15258 196 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 IGHV3-33P01772 117 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 C1QBP02746 253 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 CYBAP13498 195 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 NCALDP61601 193 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 HSPE1P61604 102 aaKnown RBP-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 MSMO1Q15800 293 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 FOXI2Q6ZQN5 318 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 SCN8AQ9UQD0 1980 aa-0.15□□□□□ -2.43
KDM1A-204ENST00000481879 DOCK5Q9H7D0 1870 aa-0.16□□□□□ -2.43
KDM1A-204ENST00000481879 ODAMA1E959 279 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 GPR31O00270 319 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 LY6G6CO95867 125 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 CST2P09228 141 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 ERVS71-1P61550 626 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 VBP1P61758 197 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 GNG5P63218 68 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 KLRD1Q13241 179 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 ASB16-AS1Q495Z4 193 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 PXT1Q8NFP0 134 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 SBF1O95248 1867 aa-0.16□□□□□ -2.44
KDM1A-204ENST00000481879 MYO18AQ92614 2054 aaKnown RBP-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 NDUFC2O95298 119 aa-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 SERPINA1P01009 418 aa-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 IDO1P14902 403 aa-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 RPL37AP61513 92 aaKnown RBP-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 LYG2Q86SG7 212 aa-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 PPTC7Q8NI37 304 aa-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 PAIP2Q9BPZ3 127 aaKnown RBP-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 KNTC1P50748 2209 aa-0.17□□□□□ -2.44
KDM1A-204ENST00000481879 KMT2CQ8NEZ4 4911 aaKnown RBP-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 ZFYVE26Q68DK2 2539 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 PIEZO1Q92508 2521 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 MUC2Q02817 5179 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 A0A0J9YY99 117 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 LYRM1O43325 122 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 CD3DP04234 171 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 CTXN2P0C2S0 81 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 PDE6GP18545 87 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 DIAPH2-AS1Q14236 149 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 AKIRIN2Q53H80 203 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 MALSU1Q96EH3 234 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 GPX7Q96SL4 187 aaPredicted RBP-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 PHB2Q99623 299 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 OR2J1Q9GZK6 312 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 PRNDQ9UKY0 176 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 ARL2BPQ9Y2Y0 163 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 PHRF1Q9P1Y6 1649 aaKnown RBP-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 SCN10AQ9Y5Y9 1956 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 CEP164Q9UPV0 1460 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 IGSF10Q6WRI0 2623 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 ABCA4P78363 2273 aa-0.18□□□□□ -2.44
KDM1A-204ENST00000481879 TENM4Q6N022 2769 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 SULT1C4O75897 302 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 TRGC2P03986 189 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 CAV3P56539 151 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 SNCBQ16143 134 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 VMA21Q3ZAQ7 101 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 LINC00299Q6ZSB3 139 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 ZCCHC23Q6ZST2 131 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 IFT20Q8IY31 132 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 C10orf111Q8N326 155 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 FAM216BQ8N7L0 139 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 MAP1LC3BQ9GZQ8 125 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 ARMC1Q9NVT9 282 aa-0.19□□□□□ -2.44
KDM1A-204ENST00000481879 ECM29Q5VYK3 1845 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 ADGRL3Q9HAR2 1447 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 PTPRZ1P23471 2315 aaPredicted RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms