RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 DSCAML1Q8TD84 2053 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
TRIM27-205ENST00000481474 IGLV3-16A0A075B6K0 115 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 SMIM8Q96KF7 97 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 IGKV1D-13A0A0B4J2D9 117 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 IGKV1-13P0DP09 117 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 LIME1Q9H400 295 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 V9GYH0 126 aa9.44□□□□□ -0.9
TRIM27-205ENST00000481474 RICTORQ6R327 1708 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 SPRY2O43597 315 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 GP9P14770 177 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 LINC01465Q8N7H1 131 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 MESP1Q9BRJ9 268 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 HEATR5AQ86XA9 2040 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 IGKV1-8A0A0C4DH67 115 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 NDUFB1O75438 58 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 COX5BP10606 129 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 RGPD4Q7Z3J3 1758 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 IZUMO1RA6ND01 250 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 NCR3O14931 201 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 ARTNQ5T4W7 220 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 KIAA0040Q15053 153 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 ADAMTSL5Q6ZMM2 481 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 C5orf66Q9H5L9 145 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 HLA-DRB4P13762 266 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 HLA-DRB4X5D2U9 266 aa9.43□□□□□ -0.9
TRIM27-205ENST00000481474 IGHV1-8P0DP01 117 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 PLXNB2O15031 1838 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 DOCK3Q8IZD9 2030 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 CSRP1P21291 193 aaKnown RBP9.42□□□□□ -0.9
TRIM27-205ENST00000481474 MRPL23Q16540 153 aaKnown RBP9.42□□□□□ -0.9
TRIM27-205ENST00000481474 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 CHCHD2Q9Y6H1 151 aaPredicted RBP9.42□□□□□ -0.9
TRIM27-205ENST00000481474 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 Q96M66 194 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 ATP6V0E1O15342 81 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 ZNF124Q15973 351 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 DOCK2Q92608 1830 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
TRIM27-205ENST00000481474 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
TRIM27-205ENST00000481474 IGKV1D-43A0A0B4J1Z2 117 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 FAM110AQ9BQ89 295 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 UBL5Q9BZL1 73 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 BCL6BQ8N143 479 aaPredicted RBP9.41□□□□□ -0.9
TRIM27-205ENST00000481474 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 TMEM178BH3BS89 294 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 IGHMP01871 453 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 LRP6O75581 1613 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 MSRB3Q8IXL7 192 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 LYZL4Q96KX0 146 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 A0A1B0GW64 132 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 CD59P13987 128 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 HIST2H2BDQ6DRA6 164 aa9.41□□□□□ -0.9
TRIM27-205ENST00000481474 LAMA4Q16363 1823 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 PTPRQQ9UMZ3 2332 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 A0A0U1RQV1 116 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 F2Z2F3 143 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 GYPEP15421 78 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 ZNF708P17019 499 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 A0A1B0GUL6 1792 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 SLURP1P55000 103 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 SPATA31B1PQ5VZV4 182 aa9.4□□□□□ -0.9
TRIM27-205ENST00000481474 IQCF6A8MYZ5 107 aa9.4□□□□□ -0.91
TRIM27-205ENST00000481474 DYNAPQ8N1N2 210 aa9.4□□□□□ -0.91
TRIM27-205ENST00000481474 Q8NFD4 153 aa9.4□□□□□ -0.91
TRIM27-205ENST00000481474 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.91
TRIM27-205ENST00000481474 FOXE3Q13461 319 aa9.4□□□□□ -0.91
TRIM27-205ENST00000481474 FAM90A1Q86YD7 464 aa9.4□□□□□ -0.91
TRIM27-205ENST00000481474 IGKV1-6A0A0C4DH72 117 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 UBE2D3P61077 147 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 A0A087WZ39 114 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 C5orf24Q7Z6I8 188 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 LY6G5BQ8NDX9 201 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
TRIM27-205ENST00000481474 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
TRIM27-205ENST00000481474 ELANEP08246 267 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 ZNF660Q6AZW8 331 aaPredicted RBP9.39□□□□□ -0.91
TRIM27-205ENST00000481474 AMBPP02760 352 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 NPSP0C0P6 89 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 FSTP19883 344 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 Q5BKY6 102 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 C9orf66Q5T8R8 295 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 IGHV4-30-2A0A087WSY4 118 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 MLANAQ16655 118 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 LECT2O14960 151 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 PRSS57Q6UWY2 283 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms