RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
RXRB-203ENST00000481441 SPATA31B1PQ5VZV4 182 aa12.12□□□□□ -0.47
RXRB-203ENST00000481441 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
RXRB-203ENST00000481441 E5RGE8 158 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 F6UB75 175 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 H3BP45 60 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 NUDT3O95989 172 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 PSG1P11464 419 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 ID1P41134 155 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 C2orf83Q53S99 150 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 NPIPB3Q92617 1050 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 SMIM8Q96KF7 97 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
RXRB-203ENST00000481441 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 A0A0J9YX75 114 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 NOXA1Q86UR1 476 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 OR51G1Q8NGK1 321 aa12.11□□□□□ -0.47
RXRB-203ENST00000481441 CIB3Q96Q77 187 aaPredicted RBP12.11□□□□□ -0.47
RXRB-203ENST00000481441 A8MTW9 85 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 F5H768 121 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 BTF3P20290 206 aaKnown RBP12.1□□□□□ -0.47
RXRB-203ENST00000481441 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
RXRB-203ENST00000481441 CAV2P51636 162 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 TAS2R30P59541 319 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 TNFSF18Q9UNG2 199 aa12.1□□□□□ -0.47
RXRB-203ENST00000481441 FAM24AA6NFZ4 105 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 ARPC5O15511 151 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 TSC22D2O75157 780 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 PRM2P04554 102 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 NKX2-5P52952 324 aaPredicted RBP12.09□□□□□ -0.47
RXRB-203ENST00000481441 ETFRF1Q6IPR1 90 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 AMTNQ6UX39 209 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 SLC24A4Q8NFF2 622 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 HYLS1Q96M11 299 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 TMEM208Q9BTX3 173 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 Q9H8V8 135 aa12.09□□□□□ -0.47
RXRB-203ENST00000481441 LYRM2Q9NU23 88 aaPredicted RBP12.09□□□□□ -0.47
RXRB-203ENST00000481441 IGSF23A1L1A6 192 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 RNF222A6NCQ9 220 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 HMSDA8MTL9 139 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
RXRB-203ENST00000481441 ISLRO14498 428 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 OR8G2PQ6IF36 304 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 TMEM252Q8N6L7 170 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 RNF141Q8WVD5 230 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 PPP1R14BQ96C90 147 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
RXRB-203ENST00000481441 STRAPQ9Y3F4 350 aaKnown RBP12.08□□□□□ -0.48
RXRB-203ENST00000481441 U3KQ87 197 aa12.08□□□□□ -0.48
RXRB-203ENST00000481441 PLAC8L1A1L4L8 177 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 RPL12P30050 165 aaKnown RBP12.07□□□□□ -0.48
RXRB-203ENST00000481441 TTC32Q5I0X7 151 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 TMEM14EPQ6UXP3 125 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 INO80EQ8NBZ0 244 aaPredicted RBP12.07□□□□□ -0.48
RXRB-203ENST00000481441 AQP10Q96PS8 301 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 PBDC1Q9BVG4 233 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 DOK5Q9P104 306 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 PFDN2Q9UHV9 154 aa12.07□□□□□ -0.48
RXRB-203ENST00000481441 ATP5G1P05496 136 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 CXCL2P19875 107 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 ATP5G3P48201 142 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 RPP30P78346 268 aaKnown RBP12.06□□□□□ -0.48
RXRB-203ENST00000481441 C1orf194Q5T5A4 169 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 LYPD1Q8N2G4 141 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 SLC25A31Q9H0C2 315 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 Q9H3A6 140 aa12.06□□□□□ -0.48
RXRB-203ENST00000481441 FLG2Q5D862 2391 aaPredicted RBP12.06□□□□□ -0.48
RXRB-203ENST00000481441 CRXO43186 299 aaPredicted RBP12.05□□□□□ -0.48
RXRB-203ENST00000481441 CST7O76096 145 aa12.05□□□□□ -0.48
RXRB-203ENST00000481441 TSPOP30536 169 aa12.05□□□□□ -0.48
RXRB-203ENST00000481441 NHLH2Q02577 135 aa12.05□□□□□ -0.48
RXRB-203ENST00000481441 CLINT1Q14677 625 aa12.05□□□□□ -0.48
RXRB-203ENST00000481441 ACOT7LQ6ZUV0 252 aa12.05□□□□□ -0.48
RXRB-203ENST00000481441 RPRMQ9NS64 109 aa12.05□□□□□ -0.48
RXRB-203ENST00000481441 CBY3A6NI87 242 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 SULT1A1P50225 295 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 RAB11AP62491 216 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 ARL16Q0P5N6 197 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 OR2F1Q13607 317 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 LGALSLQ3ZCW2 172 aaPredicted RBP12.04□□□□□ -0.48
RXRB-203ENST00000481441 STX12Q86Y82 276 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 C9orf62Q8N4C0 152 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 HSPB11Q9Y547 144 aa12.04□□□□□ -0.48
RXRB-203ENST00000481441 FAT1Q14517 4588 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms