RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 CCL5P13501 91 aa8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 IGFBP4P22692 258 aa8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 RNF152Q8N8N0 203 aa8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 AAMDCQ9H7C9 122 aa8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 RIGQ13278 110 aa8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 Q71RC1 249 aaPredicted RBP8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 GJC3Q8NFK1 279 aa8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 NTN5Q8WTR8 489 aaPredicted RBP8.22□□□□□ -1.09
PRPF4B-206ENST00000481109 LINC01546A6NGU7 62 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 NCBP2LA6PVI3 153 aaKnown RBP8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 LY6LH3BQJ8 138 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 SNRNP200O75643 2136 aaKnown RBP8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 GTSCR1Q86UQ5 136 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 DRAM1Q8N682 238 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 TSACCQ96A04 125 aaPredicted RBP8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 C2orf48Q96LS8 159 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 C9orf85Q96MD7 179 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 SIRPDQ9H106 197 aa8.21□□□□□ -1.09
PRPF4B-206ENST00000481109 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
PRPF4B-206ENST00000481109 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.1
PRPF4B-206ENST00000481109 RPS19BP1Q86WX3 136 aaKnown RBP8.21□□□□□ -1.1
PRPF4B-206ENST00000481109 OCIAD1Q9NX40 245 aa8.21□□□□□ -1.1
PRPF4B-206ENST00000481109 EYSQ5T1H1 3165 aa8.21□□□□□ -1.1
PRPF4B-206ENST00000481109 TRAV17A0A0B4J275 112 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 OVOL3O00110 214 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 PRNPP04156 253 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 FGF12P61328 243 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 TMEM155Q4W5P6 130 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 LINC00596Q86U02 117 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 H3BMM0 161 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 M0R135 149 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 CDAP32320 146 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 ZNF56Q15929 161 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 TMEM170BQ5T4T1 132 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 ASPHD1Q5U4P2 390 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 ZNF329Q86UD4 541 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 UBE2WQ96B02 151 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 ZNF799Q96GE5 643 aa8.2□□□□□ -1.1
PRPF4B-206ENST00000481109 TMEM150CB9EJG8 249 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 J3QQQ9 107 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 ENSAO43768 121 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 CXCL5P42830 114 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 SPTSSAQ969W0 71 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 AGRNO00468 2067 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 MYO15AQ9UKN7 3530 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 TRANK1O15050 2925 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 WISP1O95388 367 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 ACYP1P07311 99 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 PFN2P35080 140 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 ZNF816Q0VGE8 651 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 C1orf195Q5TG92 126 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 EMC6Q9BV81 110 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 SLC25A39Q9BZJ4 359 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 LINC00527Q9UJ94 153 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 PKIGQ9Y2B9 76 aa8.19□□□□□ -1.1
PRPF4B-206ENST00000481109 SPEGQ15772 3267 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 ZFAND5O76080 213 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 CLPSP04118 112 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 P0DMU3 169 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 FAM231AP0DMU4 169 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 FAM231CP0DMU5 169 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 FGFBP3Q8TAT2 258 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 SAP25Q8TEE9 199 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 C20orf173Q96LM9 149 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 ZNF256Q9Y2P7 627 aaPredicted RBP8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 VEGFBP49765 207 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 PRIMA1Q86XR5 153 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 KNL1Q8NG31 2342 aa8.18□□□□□ -1.1
PRPF4B-206ENST00000481109 FRG2CA6NGY1 282 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 ATOX1O00244 68 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 GFRA3O60609 400 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 CEMP1Q6PRD7 247 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 AAED1Q7RTV5 226 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 FAM90A1Q86YD7 464 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 ITLN1Q8WWA0 313 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 DEC1Q9P2X7 70 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 TANC2Q9HCD6 1990 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 HEATR1Q9H583 2144 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 MYCNOSP40205 109 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 UBE2L3P68036 154 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 C20orf204Q6ZNR8 217 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 EXOC3-AS1Q8N2X6 119 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 FMC1Q96HJ9 113 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 SHANK2-AS3Q9BTD1 123 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 TP53TG1Q9Y2A0 90 aa8.17□□□□□ -1.1
PRPF4B-206ENST00000481109 TRGV8A0A0C4DH27 118 aa8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms