RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 VSIRQ9H7M9 311 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 IGKV3-7A0A075B6H7 116 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 TRAV25A0A0B4J276 109 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 NDUFS6O75380 124 aaKnown RBP9.11□□□□□ -0.95
PTPRF-213ENST00000481019 TMEM37Q8WXS4 190 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 GPR82Q96P67 336 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 METTL26Q96S19 204 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 NKX6-2Q9C056 277 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-213ENST00000481019 SLC25A22Q9H936 323 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 SEPSECSQ9HD40 501 aaKnown RBP9.11□□□□□ -0.95
PTPRF-213ENST00000481019 RFNGQ9Y644 331 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 U3KQE9 123 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 ARL2-SNX15V9GYD0 113 aa9.11□□□□□ -0.95
PTPRF-213ENST00000481019 A0A1W2PS18 150 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 NPPCP23582 126 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 CRYBB3P26998 211 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 TFPI2P48307 235 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 ZNF124Q15973 351 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 HAGHQ16775 308 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 ODF3L2Q3SX64 289 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 COMMD7Q86VX2 200 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 BPIFA4PQ86YQ2 179 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 PCNPQ8WW12 178 aaKnown RBP9.1□□□□□ -0.95
PTPRF-213ENST00000481019 SLC25A39Q9BZJ4 359 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-213ENST00000481019 EIF5A2Q9GZV4 153 aaKnown RBP9.1□□□□□ -0.95
PTPRF-213ENST00000481019 TMEM231Q9H6L2 316 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 KMT2CQ8NEZ4 4911 aaKnown RBP9.1□□□□□ -0.95
PTPRF-213ENST00000481019 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
PTPRF-213ENST00000481019 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
PTPRF-213ENST00000481019 OR7C2O60412 319 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 RPL7P18124 248 aaKnown RBP9.09□□□□□ -0.95
PTPRF-213ENST00000481019 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 GCSAMLQ5JQS6 135 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 C1orf194Q5T5A4 169 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 GRAMD2BQ96HH9 432 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 FAM210AQ96ND0 272 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 SPAG8Q99932 426 aaPredicted RBP9.09□□□□□ -0.95
PTPRF-213ENST00000481019 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 RETNQ9HD89 108 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 DOK5Q9P104 306 aa9.09□□□□□ -0.95
PTPRF-213ENST00000481019 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
PTPRF-213ENST00000481019 S100A1P23297 94 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 MEOX2P50222 304 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 GUK1Q16774 197 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 PATE2Q6UY27 113 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 WFDC3Q8IUB2 231 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 SHANK2-AS3Q9BTD1 123 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 PAXXQ9BUH6 204 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 OR51M1Q9H341 326 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 TMEM14CQ9P0S9 112 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 VAX2Q9UIW0 290 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 U3KQK5 164 aa9.08□□□□□ -0.96
PTPRF-213ENST00000481019 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 ZNF98A6NK75 572 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 CD5P06127 495 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 GCHFRP30047 84 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 APRG1Q8IVJ8 170 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 MS4A6AQ9H2W1 248 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 GNG13Q9P2W3 67 aa9.07□□□□□ -0.96
PTPRF-213ENST00000481019 A0A1B0GV50 99 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 H3BRN7 92 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 HMGB3O15347 200 aaKnown RBP9.06□□□□□ -0.96
PTPRF-213ENST00000481019 HIST1H1EP10412 219 aaKnown RBP9.06□□□□□ -0.96
PTPRF-213ENST00000481019 BCL2P10415 239 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
PTPRF-213ENST00000481019 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 OR8I2Q8N0Y5 310 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 UHRF2Q96PU4 802 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 TCEAL7Q9BRU2 100 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 TREM1Q9NP99 234 aa9.06□□□□□ -0.96
PTPRF-213ENST00000481019 OR4C46A6NHA9 309 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 F6UZH7 168 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 PDE6DO43924 150 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 NBEAP1P0C6P0 100 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 GALR1P47211 349 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 UBE2L3P68036 154 aaKnown RBP9.05□□□□□ -0.96
PTPRF-213ENST00000481019 PDE6HQ13956 83 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 ZNF506Q5JVG8 444 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 LYPD1Q8N2G4 141 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 FAM167A-AS1Q96KT0 104 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 RCHY1Q96PM5 261 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 SLC25A2Q9BXI2 301 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 MAP6D1Q9H9H5 199 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms