RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
SNRNP200-205ENST00000480835 HIST1H2BAQ96A08 127 aa11.28□□□□□ -0.6
SNRNP200-205ENST00000480835 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
SNRNP200-205ENST00000480835 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
SNRNP200-205ENST00000480835 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
SNRNP200-205ENST00000480835 SMAD5-AS1Q9Y6J3 95 aa11.28□□□□□ -0.6
SNRNP200-205ENST00000480835 IGHV3-66A0A0C4DH42 116 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 TMEM213A2RRL7 107 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 ZNF727A8MUV8 499 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 CHEK1O14757 476 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 SLC25A5P05141 298 aaKnown RBP11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 FHL3Q13643 280 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 NDUFA11Q86Y39 141 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 C11orf44Q8N8P7 122 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 PARLQ9H300 379 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 CLEC5AQ9NY25 188 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 PEMTQ9UBM1 199 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
SNRNP200-205ENST00000480835 IGHV3OR16-13A0A075B7E8 117 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 IGHV3-74A0A0B4J1X5 117 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 H3BTX0 84 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 M0QZ24 198 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 CCL24O00175 119 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 SNRPCP09234 159 aaKnown RBP11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 SLURP1P55000 103 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 CMTM2Q8TAZ6 248 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
SNRNP200-205ENST00000480835 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 SLC17A3O00476 420 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 PEX7O00628 323 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 SNAPINO95295 136 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 S100A9P06702 114 aaKnown RBP11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 SAMD13Q5VXD3 122 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 ZNF331Q9NQX6 463 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 NAT8Q9UHE5 227 aa11.25□□□□□ -0.61
SNRNP200-205ENST00000480835 CBLN1P23435 193 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 AKR1C3P42330 323 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 CSN1S1P47710 185 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 GUCA2BQ16661 112 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 TMEM241Q24JQ0 296 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 OR9G4Q8NGQ1 327 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 SETXQ7Z333 2677 aaKnown RBP11.24□□□□□ -0.61
SNRNP200-205ENST00000480835 SERTM2A0A1B0GWG4 89 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 C9JCJ5 164 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 TAS2R60P59551 318 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 NRN1Q9NPD7 142 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 LY96Q9Y6Y9 160 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
SNRNP200-205ENST00000480835 K7EQM0 130 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 TCRAP04437 139 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 FOLR2P14207 255 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 RPL35P42766 123 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 KRTAP10-3P60369 221 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 CLRN3Q8NCR9 226 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 DUX3Q96PT4 197 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 SDF2L1Q9HCN8 221 aa11.22□□□□□ -0.61
SNRNP200-205ENST00000480835 M0R036 132 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 GNG5P63218 68 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 AWAT1Q58HT5 328 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 DERL1Q9BUN8 251 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 KLF12Q9Y4X4 402 aa11.21□□□□□ -0.61
SNRNP200-205ENST00000480835 TRBV6-1A0A0K0K1D8 114 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 FBLL1A6NHQ2 334 aaKnown RBP11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 B4DEV8 164 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 OVOL1O14753 267 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 CSN3P07498 182 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 EDN2P20800 178 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 UBE2G1P62253 170 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 RPL11P62913 178 aaKnown RBP11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 RHEBQ15382 184 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 C16orf92Q96LL3 132 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 SIGLEC8Q9NYZ4 499 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 MLXQ9UH92 298 aa11.2□□□□□ -0.62
SNRNP200-205ENST00000480835 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms