RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PEA15Q15121 130 aa13.31□□□□□ -0.28
UPF3A-206ENST00000480362 TCF24Q7RTU0 167 aa13.31□□□□□ -0.28
UPF3A-206ENST00000480362 MLXQ9UH92 298 aa13.31□□□□□ -0.28
UPF3A-206ENST00000480362 A0A1W2PRE2 83 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 NDUFB4O95168 129 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 ATP5G3P48201 142 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
UPF3A-206ENST00000480362 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 EIF4E3Q8N5X7 224 aaKnown RBP13.3□□□□□ -0.28
UPF3A-206ENST00000480362 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 TREM1Q9NP99 234 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 ARL2-SNX15V9GYD0 113 aa13.3□□□□□ -0.28
UPF3A-206ENST00000480362 C11orf94C9JXX5 98 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 SLC17A3O00476 420 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 CD5P06127 495 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
UPF3A-206ENST00000480362 MEF2BQ02080 365 aaPredicted RBP13.29□□□□□ -0.28
UPF3A-206ENST00000480362 FAM90A2PQ658T7 463 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 UQCC3Q6UW78 93 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 SHISA2Q6UWI4 295 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 LINC00482Q8N8I6 264 aa13.29□□□□□ -0.28
UPF3A-206ENST00000480362 SETD2Q9BYW2 2564 aaPredicted RBP13.28□□□□□ -0.28
UPF3A-206ENST00000480362 IGKV3-7A0A075B6H7 116 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 PGPA6NDG6 321 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 C9JQL5 133 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 CD81P60033 236 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 PDE6HQ13956 83 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 TXNDC17Q9BRA2 123 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 Q9H3A6 140 aa13.28□□□□□ -0.28
UPF3A-206ENST00000480362 GGTLC3B5MD39 225 aa13.27□□□□□ -0.29
UPF3A-206ENST00000480362 MEOX2P50222 304 aa13.27□□□□□ -0.29
UPF3A-206ENST00000480362 LYPD1Q8N2G4 141 aa13.27□□□□□ -0.29
UPF3A-206ENST00000480362 DYNLRB2Q8TF09 96 aa13.27□□□□□ -0.29
UPF3A-206ENST00000480362 NKX6-2Q9C056 277 aaPredicted RBP13.27□□□□□ -0.29
UPF3A-206ENST00000480362 SMDT1Q9H4I9 107 aa13.27□□□□□ -0.29
UPF3A-206ENST00000480362 SIGLEC8Q9NYZ4 499 aa13.27□□□□□ -0.29
UPF3A-206ENST00000480362 ZNF253O75346 499 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
UPF3A-206ENST00000480362 PSG9Q00887 426 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 DEFB114Q30KQ6 69 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 IGFL4Q6B9Z1 124 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 CCDC28AQ8IWP9 274 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 GBGT1Q8N5D6 347 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 NRN1Q9NPD7 142 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 ZNF331Q9NQX6 463 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-206ENST00000480362 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
UPF3A-206ENST00000480362 SAP30O75446 220 aa13.25□□□□□ -0.29
UPF3A-206ENST00000480362 KRTAP21-3Q3LHN1 58 aa13.25□□□□□ -0.29
UPF3A-206ENST00000480362 C16orf92Q96LL3 132 aa13.25□□□□□ -0.29
UPF3A-206ENST00000480362 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
UPF3A-206ENST00000480362 AAMDCQ9H7C9 122 aa13.25□□□□□ -0.29
UPF3A-206ENST00000480362 PDE6DO43924 150 aa13.24□□□□□ -0.29
UPF3A-206ENST00000480362 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
UPF3A-206ENST00000480362 WFDC3Q8IUB2 231 aa13.24□□□□□ -0.29
UPF3A-206ENST00000480362 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
UPF3A-206ENST00000480362 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
UPF3A-206ENST00000480362 TRAV8-2A0A0B4J237 113 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 F6UZH7 168 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
UPF3A-206ENST00000480362 SOCS3O14543 225 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 HLA-DMBP28068 263 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 TFPI2P48307 235 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 CEBPGP53567 150 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 CD300EQ496F6 205 aaPredicted RBP13.23□□□□□ -0.29
UPF3A-206ENST00000480362 RBPMS2Q6ZRY4 209 aaKnown RBP13.23□□□□□ -0.29
UPF3A-206ENST00000480362 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
UPF3A-206ENST00000480362 SCO2A0A1W2PP80 73 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 TMEM250H0YL14 139 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 NDUFS6O75380 124 aaKnown RBP13.22□□□□□ -0.29
UPF3A-206ENST00000480362 GNG5P63218 68 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 TMEM61Q8N0U2 210 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 RNF182Q8N6D2 247 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 SPATA3Q8NHX4 192 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 CMTM2Q8TAZ6 248 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 DCANP1Q8TF63 244 aa13.22□□□□□ -0.29
UPF3A-206ENST00000480362 FBN1P35555 2871 aaKnown RBP13.22□□□□□ -0.29
UPF3A-206ENST00000480362 TMEM218A2RU14 115 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 M0R3E3 92 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 TSPAN4O14817 238 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 SFTA3P0C7M3 94 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 MDFIQ99750 246 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 RPH3ALQ9UNE2 315 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 PRELID1Q9Y255 219 aa13.21□□□□□ -0.29
UPF3A-206ENST00000480362 TRAV25A0A0B4J276 109 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 K7EQG2 157 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 ISLRO14498 428 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
UPF3A-206ENST00000480362 ID1P41134 155 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 CSN1S1P47710 185 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 PSG3Q16557 428 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 SAMD13Q5VXD3 122 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 C11orf52Q96A22 123 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 TCEAL7Q9BRU2 100 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
UPF3A-206ENST00000480362 WNK1Q9H4A3 2382 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms