RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TAS2R45P59539 299 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 RAB2AP61019 212 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 STHQ8IWL8 128 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 SAT2Q96F10 170 aaPredicted RBP14.56□□□□□ -0.08
LIME1-205ENST00000480139 LINC00052Q96N35 136 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 ASCL2Q99929 193 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 ZNF331Q9NQX6 463 aaPredicted RBP14.56□□□□□ -0.08
LIME1-205ENST00000480139 RPRMQ9NS64 109 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 CLEC5AQ9NY25 188 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 HIST1H1EP10412 219 aaKnown RBP14.55□□□□□ -0.08
LIME1-205ENST00000480139 PDE6HQ13956 83 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 KHDC3LQ587J8 217 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 FOXI2Q6ZQN5 318 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 TMUB2Q71RG4 321 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 TRPT1Q86TN4 253 aaKnown RBP14.55□□□□□ -0.08
LIME1-205ENST00000480139 OR10G4Q8NGN3 311 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 OR10G9Q8NGN4 311 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 OR10G7Q8NGN6 311 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 LRRC20Q8TCA0 184 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 OR51M1Q9H341 326 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 SAV1Q9H4B6 383 aaPredicted RBP14.55□□□□□ -0.08
LIME1-205ENST00000480139 ZNF586Q9NXT0 402 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 TGP01266 2768 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 DNAH9Q9NYC9 4486 aa14.55□□□□□ -0.08
LIME1-205ENST00000480139 COL7A1Q02388 2944 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 TRBV19A0A075B6N1 114 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 A0A1W2PPV4 95 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 KNCNA6PVL3 124 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 UBE2CO00762 179 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 PYYP10082 97 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 HLA-DRB4P13762 266 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 ACTL10Q5JWF8 245 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 C20orf173Q96LM9 149 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 HLA-DRB4X5D2U9 266 aa14.54□□□□□ -0.08
LIME1-205ENST00000480139 SLC17A3O00476 420 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 PFDN1O60925 122 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 SPP1P10451 314 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 RPL35AP18077 110 aaKnown RBP14.53□□□□□ -0.08
LIME1-205ENST00000480139 EIF5AP63241 154 aaKnown RBP14.53□□□□□ -0.08
LIME1-205ENST00000480139 TMEM41BQ5BJD5 291 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 RPP25LQ8N5L8 163 aaKnown RBP14.53□□□□□ -0.08
LIME1-205ENST00000480139 CLUHP3Q96NS8 147 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 SPATA25Q9BR10 227 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 PAXXQ9BUH6 204 aa14.53□□□□□ -0.08
LIME1-205ENST00000480139 H3BMM0 161 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 OR7C2O60412 319 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 CDC34P49427 236 aaPredicted RBP14.52□□□□□ -0.09
LIME1-205ENST00000480139 CD300CQ08708 224 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 PSG3Q16557 428 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 LGALSLQ3ZCW2 172 aaPredicted RBP14.52□□□□□ -0.09
LIME1-205ENST00000480139 FAM122CQ6P4D5 195 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 PQLC2Q6ZP29 291 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 RNF182Q8N6D2 247 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 FXYD5Q96DB9 178 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 ZNF503Q96F45 646 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 ZNF471Q9BX82 626 aaPredicted RBP14.52□□□□□ -0.09
LIME1-205ENST00000480139 ZMAT4Q9H898 229 aa14.52□□□□□ -0.09
LIME1-205ENST00000480139 A0A0J9YX75 114 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 SNRPCP09234 159 aaKnown RBP14.51□□□□□ -0.09
LIME1-205ENST00000480139 NBEAP1P0C6P0 100 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 PSG9Q00887 426 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 ZFP69Q49AA0 526 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 GDF5OSQ5U4N7 250 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 IGFL4Q6B9Z1 124 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 EBLN2Q6P2I7 272 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 MORN3Q6PF18 240 aaPredicted RBP14.51□□□□□ -0.09
LIME1-205ENST00000480139 Q6ZWC4 215 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 RNF141Q8WVD5 230 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 CSTL1Q9H114 145 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 AGRNO00468 2067 aa14.51□□□□□ -0.09
LIME1-205ENST00000480139 H3BTX0 84 aa14.5□□□□□ -0.09
LIME1-205ENST00000480139 NDUFB4O95168 129 aa14.5□□□□□ -0.09
LIME1-205ENST00000480139 SEC11BP0C7V7 166 aa14.5□□□□□ -0.09
LIME1-205ENST00000480139 ZNF738Q8NE65 137 aa14.5□□□□□ -0.09
LIME1-205ENST00000480139 STOML3Q8TAV4 291 aa14.5□□□□□ -0.09
LIME1-205ENST00000480139 A8MTW9 85 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 OR10J4P0C629 311 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 STAG3L2P0CL84 134 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 STAG3L3P0CL85 134 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 TPT1P13693 172 aaKnown RBP14.49□□□□□ -0.09
LIME1-205ENST00000480139 HLA-DMBP28068 263 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 UBE2L3P68036 154 aaKnown RBP14.49□□□□□ -0.09
LIME1-205ENST00000480139 BAP18Q8IXM2 172 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 RAB24Q969Q5 203 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 MRPL53Q96EL3 112 aaKnown RBP14.49□□□□□ -0.09
LIME1-205ENST00000480139 ACTR3CQ9C0K3 210 aaPredicted RBP14.49□□□□□ -0.09
LIME1-205ENST00000480139 TP53TG1Q9Y2A0 90 aa14.49□□□□□ -0.09
LIME1-205ENST00000480139 DEFB1P60022 68 aa14.48□□□□□ -0.09
LIME1-205ENST00000480139 NUTF2P61970 127 aaKnown RBP14.48□□□□□ -0.09
LIME1-205ENST00000480139 AKR1C8PQ5T2L2 129 aa14.48□□□□□ -0.09
LIME1-205ENST00000480139 BLNKQ8WV28 456 aa14.48□□□□□ -0.09
LIME1-205ENST00000480139 PRELID1Q9Y255 219 aa14.48□□□□□ -0.09
LIME1-205ENST00000480139 F6UB75 175 aa14.47□□□□□ -0.09
LIME1-205ENST00000480139 DUSP14O95147 198 aaKnown RBP14.47□□□□□ -0.09
LIME1-205ENST00000480139 LYPD1Q8N2G4 141 aa14.47□□□□□ -0.09
LIME1-205ENST00000480139 C9orf62Q8N4C0 152 aa14.47□□□□□ -0.09
LIME1-205ENST00000480139 RPUSD4Q96CM3 377 aaKnown RBP14.47□□□□□ -0.09
LIME1-205ENST00000480139 AAMDCQ9H7C9 122 aa14.47□□□□□ -0.09
LIME1-205ENST00000480139 CTXND1A0A1B0GTU2 59 aa14.46□□□□□ -0.09
LIME1-205ENST00000480139 UMAD1C9J7I0 102 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms