RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 IGKV1OR2-108A0A075B7D4 117 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 H3BRN7 92 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 TSC22D2O75157 780 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 SNRPCP09234 159 aaKnown RBP5.06□□□□□ -1.6
COL17A1-205ENST00000480127 PAX9P55771 341 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 CCL18P55774 89 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 DLK1P80370 383 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 SLC38A11Q08AI6 406 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 OR5I1Q13606 314 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 LGALS9BQ3B8N2 356 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 TMEM88Q6PEY1 159 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 LCN15Q6UWW0 184 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 STX12Q86Y82 276 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 TMEM256Q8N2U0 113 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF709Q8N972 641 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 C15orf53Q8NAA6 179 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 OR11H7Q8NGC8 314 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 RPUSD4Q96CM3 377 aaKnown RBP5.06□□□□□ -1.6
COL17A1-205ENST00000480127 C20orf173Q96LM9 149 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 SOSTQ9BQB4 213 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 ARV1Q9H2C2 271 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 PLA2G2EQ9NZK7 142 aa5.06□□□□□ -1.6
COL17A1-205ENST00000480127 TRAV6A0A075B6T7 132 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 PMS2P5A8MQ11 134 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 LYRM9A8MSI8 78 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 SNURFLB1AK76 121 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 SOCS3O14543 225 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 CCSO14618 274 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 AGPAT2O15120 278 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 ATP5G1P05496 136 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 PRB4P10163 310 aaPredicted RBP5.05□□□□□ -1.6
COL17A1-205ENST00000480127 ATP5G3P48201 142 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 CAMLGP49069 296 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 HBG1P69891 147 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 HBG2P69892 147 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 BAXQ07812 192 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 CNPY1Q3B7I2 92 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 C1orf134Q5TEV5 83 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 C10orf113Q5VZT2 155 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 LINC00305Q7Z4B0 112 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 C12orf45Q8N5I9 185 aaPredicted RBP5.05□□□□□ -1.6
COL17A1-205ENST00000480127 ZBTB8BQ8NAP8 495 aaPredicted RBP5.05□□□□□ -1.6
COL17A1-205ENST00000480127 OR8A1Q8NGG7 326 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 C16orf74Q96GX8 76 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 SMIM8Q96KF7 97 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 CLUHP3Q96NS8 147 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 SLC50A1Q9BRV3 221 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 SRRQ9GZT4 340 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 C20orf85Q9H1P6 137 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 RCL1Q9Y2P8 373 aaKnown RBP5.05□□□□□ -1.6
COL17A1-205ENST00000480127 PXMP4Q9Y6I8 212 aa5.05□□□□□ -1.6
COL17A1-205ENST00000480127 H3BTX0 84 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 CST7O76096 145 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 RLN2P04090 185 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 CDKN1BP46527 198 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 TAS2R30P59541 319 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 TAS2R60P59551 318 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 ID3Q02535 119 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 PSG3Q16557 428 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 MZT2BQ6NZ67 158 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 Q6ZR54 194 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 C1orf158Q8N1D5 194 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 OR1L4Q8NGR5 311 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 PFDN5Q99471 154 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 UQCC1Q9NVA1 299 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 TIMM9Q9Y5J7 89 aa5.04□□□□□ -1.6
COL17A1-205ENST00000480127 TIMM8BQ9Y5J9 83 aaPredicted RBP5.04□□□□□ -1.6
COL17A1-205ENST00000480127 TRGV2A0A075B6R0 118 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 UBE2L5PA0A1B0GUS4 154 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 FAM240BA0A1B0GVZ2 78 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 H7BYZ3 331 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 ZNF701M0R085 212 aaPredicted RBP5.03□□□□□ -1.6
COL17A1-205ENST00000480127 LYRM1O43325 122 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 CCNKO75909 580 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
COL17A1-205ENST00000480127 IL7P13232 177 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 CXCL2P19875 107 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 CXCL3P19876 107 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 LEPP41159 167 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 FCN2Q15485 313 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 BAK1Q16611 211 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 RNF212Q495C1 297 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 TMEM182Q6ZP80 229 aaPredicted RBP5.03□□□□□ -1.6
COL17A1-205ENST00000480127 GNPNAT1Q96EK6 184 aaPredicted RBP5.03□□□□□ -1.6
COL17A1-205ENST00000480127 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 AAMDCQ9H7C9 122 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 GPN1Q9HCN4 374 aaPredicted RBP5.03□□□□□ -1.6
COL17A1-205ENST00000480127 NOP10Q9NPE3 64 aaKnown RBP5.03□□□□□ -1.6
COL17A1-205ENST00000480127 NUDT15Q9NV35 164 aa5.03□□□□□ -1.6
COL17A1-205ENST00000480127 A0A087X0K7 114 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 TRAV8-2A0A0B4J237 113 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 C7orf66A4D0T2 115 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 PRSS46E5RG02 174 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 FNDC10F2Z333 226 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 CDK2AP2O75956 126 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 PRM2P04554 102 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 FGF7P21781 194 aa5.02□□□□□ -1.61
COL17A1-205ENST00000480127 FAM3BP58499 235 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms