RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 TGFAP01135 160 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 CD5P06127 495 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 MAS1LP35410 378 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 RAB5CP51148 216 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 ERHP84090 104 aaKnown RBP3.91□□□□□ -1.78
COMMD3-212ENST00000479958 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
COMMD3-212ENST00000479958 LY6EQ16553 131 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 HAGHQ16775 308 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 PVRIGQ6DKI7 326 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 SLC16A13Q7RTY0 426 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 OR5T1Q8NG75 326 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 OR10G4Q8NGN3 311 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 OR10G9Q8NGN4 311 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 LRRC20Q8TCA0 184 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 ACY3Q96HD9 319 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 NARS2Q96I59 477 aaKnown RBP3.91□□□□□ -1.78
COMMD3-212ENST00000479958 GGACTQ9BVM4 153 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 TIMM9Q9Y5J7 89 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 PXMP4Q9Y6I8 212 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 CCDC168Q8NDH2 2452 aa3.91□□□□□ -1.78
COMMD3-212ENST00000479958 AKAP9Q99996 3911 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 UNC79Q9P2D8 2635 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 TRAV5A0A0B4J249 113 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 TMEM218A2RU14 115 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 MAP1LC3B2A6NCE7 125 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 G3V318 75 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 I3L2K1 104 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 MT-CO2P00403 227 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 CRYGCP07315 174 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 GPX4P36969 197 aaPredicted RBP3.9□□□□□ -1.78
COMMD3-212ENST00000479958 OPRK1P41145 380 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 CDX1P47902 265 aaPredicted RBP3.9□□□□□ -1.78
COMMD3-212ENST00000479958 RND2P52198 227 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 ZNF90Q03938 601 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 GUCA2BQ16661 112 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 GUK1Q16774 197 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 TMEM249Q2WGJ8 235 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 PATE2Q6UY27 113 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 IL34Q6ZMJ4 242 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 Q6ZVQ6 151 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 COX8CQ7Z4L0 72 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 TMEM144Q7Z5S9 345 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 LRRC75A-AS1Q8N1F1 130 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 ZNF709Q8N972 641 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 KLHL30-AS1Q8NEE0 82 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 LFNGQ8NES3 379 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 RXFP4Q8TDU9 374 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 ARPC1AQ92747 370 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 FAM210AQ96ND0 272 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 SSX3Q99909 188 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 MAP1LC3BQ9GZQ8 125 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 NPVFQ9HCQ7 196 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 TNFRSF19Q9NS68 423 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 SLC39A9Q9NUM3 307 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 LINC00527Q9UJ94 153 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 F11RQ9Y624 299 aaKnown RBP3.9□□□□□ -1.78
COMMD3-212ENST00000479958 MXRA5Q9NR99 2828 aa3.9□□□□□ -1.78
COMMD3-212ENST00000479958 FASNP49327 2511 aaKnown RBP3.9□□□□□ -1.79
COMMD3-212ENST00000479958 ZFHX3Q15911 3703 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 TRAV1-1A0A0B4J248 108 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 A6NDX4 124 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 RBFOX3A6NFN3 312 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 RPL37AP8A6NKH3 93 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 H3BUX3 64 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 K7EIM0 57 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 IGHV3-23P01764 117 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 APOC3P02656 99 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 SRP19P09132 144 aaKnown RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 SFTA3P0C7M3 94 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 CTRB1P17538 263 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 M6PRP20645 277 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 ZP3P21754 424 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 BRS3P32247 399 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 SUB1P53999 127 aaKnown RBP eCLIP3.89□□□□□ -1.791e-6■■■■■ 30.7
COMMD3-212ENST00000479958 ATP5IP56385 69 aaPredicted RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 B2MP61769 119 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 SERF2P84101 59 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 DEFB112Q30KQ8 113 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 ACOT6Q3I5F7 207 aaPredicted RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 TIGITQ495A1 244 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 CTRB2Q6GPI1 263 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 ZNF562Q6V9R5 426 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 DPPA3Q6W0C5 159 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 CYP2G1PQ6ZSU1 146 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 MIR17HGQ75NE6 70 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 C5orf56Q8N8D9 126 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 OR1P1Q8NH06 330 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 RNASEH2CQ8TDP1 164 aaKnown RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 SLC35E1Q96K37 410 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 RBM14Q96PK6 669 aaKnown RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 ALKBH7Q9BT30 221 aaPredicted RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 ACTR3CQ9C0K3 210 aaPredicted RBP3.89□□□□□ -1.79
COMMD3-212ENST00000479958 DOK5Q9P104 306 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 GNG13Q9P2W3 67 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 ACANP16112 2415 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 TLN2Q9Y4G6 2542 aa3.89□□□□□ -1.79
COMMD3-212ENST00000479958 CTXND1A0A1B0GTU2 59 aa3.88□□□□□ -1.79
COMMD3-212ENST00000479958 PSMB11A5LHX3 300 aa3.88□□□□□ -1.79
COMMD3-212ENST00000479958 ZFP92A6NM28 416 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms