RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 INSP01308 110 aa12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 CXCL3P19876 107 aa12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 PLP1P60201 277 aa12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 TEPPQ6URK8 271 aa12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 MGST2Q99735 147 aa12.31□□□□□ -0.44
ECHDC1-216ENST00000479525 FAM24AA6NFZ4 105 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 BOLA2-SMG1P6H3BVE0 249 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 SLC17A3O00476 420 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 GOSR2O14653 212 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 MRPS12O15235 138 aaKnown RBP12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 CST7O76096 145 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 BCAP31P51572 246 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 PSG3Q16557 428 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 SAMD13Q5VXD3 122 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 LINC00305Q7Z4B0 112 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 KIAA1109Q2LD37 5005 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 PKD1P98161 4303 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 C5orf51A6NDU8 294 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 J3KRW8 73 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 K7EPK0 472 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 L7N2F9 121 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 RTL8CO15255 209 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 TSC22D2O75157 780 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 TCRBP04435 133 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 PKHD1P08F94 4074 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 VAMP2P63027 116 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 NUDT15Q9NV35 164 aa12.3□□□□□ -0.44
ECHDC1-216ENST00000479525 A0A087X0K7 114 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 TRAV5A0A0B4J249 113 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 PRAC2D3DTV9 90 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 SELENOTP62341 195 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 MIC13Q5XKP0 118 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 TMEM37Q8WXS4 190 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 RPUSD4Q96CM3 377 aaKnown RBP12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 LINC01587Q99440 93 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 PPP1R14DQ9NXH3 145 aa12.29□□□□□ -0.44
ECHDC1-216ENST00000479525 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
ECHDC1-216ENST00000479525 COX7A2P2O60397 106 aa12.28□□□□□ -0.44
ECHDC1-216ENST00000479525 CAV2P51636 162 aa12.28□□□□□ -0.44
ECHDC1-216ENST00000479525 S100A10P60903 97 aa12.28□□□□□ -0.44
ECHDC1-216ENST00000479525 ZNF846Q147U1 533 aa12.28□□□□□ -0.44
ECHDC1-216ENST00000479525 OPCMLQ14982 345 aa12.28□□□□□ -0.44
ECHDC1-216ENST00000479525 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.45
ECHDC1-216ENST00000479525 A0A1B0GVY2 172 aa12.27□□□□□ -0.45
ECHDC1-216ENST00000479525 S100A7P31151 101 aa12.27□□□□□ -0.45
ECHDC1-216ENST00000479525 ZNF546Q86UE3 836 aa12.27□□□□□ -0.45
ECHDC1-216ENST00000479525 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 PRSS29PA6NIE9 313 aa12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 TAS2R30P59541 319 aa12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 NRARPQ7Z6K4 114 aa12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 ZNF431Q8TF32 576 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 C11orf1Q9H5F2 150 aa12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 ZNF331Q9NQX6 463 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-216ENST00000479525 UBE2L5PA0A1B0GUS4 154 aa12.25□□□□□ -0.45
ECHDC1-216ENST00000479525 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
ECHDC1-216ENST00000479525 FNDC10F2Z333 226 aa12.25□□□□□ -0.45
ECHDC1-216ENST00000479525 H3BQ15 152 aa12.25□□□□□ -0.45
ECHDC1-216ENST00000479525 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
ECHDC1-216ENST00000479525 C12orf45Q8N5I9 185 aaPredicted RBP12.25□□□□□ -0.45
ECHDC1-216ENST00000479525 F5H768 121 aa12.24□□□□□ -0.45
ECHDC1-216ENST00000479525 H2AFB2P0C5Z0 115 aa12.24□□□□□ -0.45
ECHDC1-216ENST00000479525 CAMLGP49069 296 aa12.24□□□□□ -0.45
ECHDC1-216ENST00000479525 RAB32Q13637 225 aa12.24□□□□□ -0.45
ECHDC1-216ENST00000479525 OXA1LQ15070 435 aa12.24□□□□□ -0.45
ECHDC1-216ENST00000479525 LCN15Q6UWW0 184 aa12.24□□□□□ -0.45
ECHDC1-216ENST00000479525 NUDT3O95989 172 aa12.23□□□□□ -0.45
ECHDC1-216ENST00000479525 BAXQ07812 192 aa12.23□□□□□ -0.45
ECHDC1-216ENST00000479525 BPIFA4PQ86YQ2 179 aa12.23□□□□□ -0.45
ECHDC1-216ENST00000479525 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
ECHDC1-216ENST00000479525 SIX6O95475 246 aa12.22□□□□□ -0.45
ECHDC1-216ENST00000479525 CDKN1BP46527 198 aa12.22□□□□□ -0.45
ECHDC1-216ENST00000479525 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
ECHDC1-216ENST00000479525 LYRM9A8MSI8 78 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 IGLC2P0DOY2 106 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 GFI1BQ5VTD9 330 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 Q6ZR54 194 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 LINC00336Q6ZUF6 198 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 FAM210BQ96KR6 192 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 GGACTQ9BVM4 153 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 UQCC1Q9NVA1 299 aa12.21□□□□□ -0.45
ECHDC1-216ENST00000479525 DNAH11Q96DT5 4516 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 FGF7P21781 194 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 ERCC8Q13216 396 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 CNPY1Q3B7I2 92 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 GCSAMLQ5JQS6 135 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 TMEM252Q8N6L7 170 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 DNAJC4Q9NNZ3 241 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 WDR83OSQ9Y284 106 aa12.2□□□□□ -0.46
ECHDC1-216ENST00000479525 M0R3E3 92 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 PYYP10082 97 aa12.19□□□□□ -0.46
ECHDC1-216ENST00000479525 TSPOP30536 169 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms