RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 A0A1W2PS18 150 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 RBMY1BA6NDE4 496 aaKnown RBP2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 RBMY1EA6NEQ0 496 aaKnown RBP2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 E9PLD3 99 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 NDUFB3O43676 98 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 SYNGR2O43760 224 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 CST7O76096 145 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 TCRAP04437 139 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 RBMY1DP0C7P1 496 aaKnown RBP2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 RBMY1A1P0DJD3 496 aaKnown RBP2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 FABP2P12104 132 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF80P51504 273 aaPredicted RBP2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 LINC00313P59037 77 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 TAS2R45P59539 299 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 IGFBP7Q16270 282 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 C6orf99Q4VX62 202 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 BPIFA4PQ86YQ2 179 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 RAB42Q8N4Z0 105 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF491Q8N8L2 437 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 PPDPFLQ8WWR9 84 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 PRELID3AQ96N28 172 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 C18orf15Q96N68 181 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 SIX2Q9NPC8 291 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 CHD7Q9P2D1 2997 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF222Q9UK12 451 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 MOB4Q9Y3A3 225 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 SPCS1Q9Y6A9 102 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 V9GY05 133 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 CHD9Q3L8U1 2897 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 REV3LO60673 3130 aa2.61□□□□□ -1.99
FNDC3B-209ENST00000478016 KMT2EQ8IZD2 1858 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SCN10AQ9Y5Y9 1956 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SMCHD1A6NHR9 2005 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 DOCK6Q96HP0 2047 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 IGHV3OR16-12A0A075B7B8 117 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 IGLV9-49A0A0B4J1Y8 123 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 A0A0J9YW62 118 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SNRPGP15A8MWD9 76 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 C4orf51C9J302 202 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 C16orf97H3BN30 126 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SYS1-DBNDD2H3BUS1 97 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 BMPR1BO00238 502 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF737O75373 536 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SNCGO76070 127 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 IL5P05113 134 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 CXCL1P09341 107 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 FRMD6-AS1P0C7T7 363 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 LGALS3P17931 250 aaKnown RBP2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 CBLN1P23435 193 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 LGALS9CQ6DKI2 356 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF329Q86UD4 541 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SBSPONQ8IVN8 264 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF101Q8IZC7 436 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 METTL27Q8N6F8 245 aaPredicted RBP2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 POM121L12Q8N7R1 296 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 MORN4Q8NDC4 146 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF555Q8NEP9 628 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 FLVCR1-AS1Q8TAF5 88 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SCRT1Q9BWW7 348 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 SLC35B3Q9H1N7 401 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF581Q9P0T4 197 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 CKLFQ9UBR5 152 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 LINC00588Q9Y4M8 146 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 TTC28Q96AY4 2481 aa2.6□□□□□ -1.99
FNDC3B-209ENST00000478016 NUP205Q92621 2012 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 TRBV20OR9-2A0A075B6H5 130 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 IGHV3OR16-13A0A075B7E8 117 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 IGHV1-69DA0A0B4J2H0 117 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 IGHV3-20A0A0C4DH32 117 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 IGKV1-8A0A0C4DH67 115 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 KLF18A0A0U1RQI7 1052 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 MUC21A0A140T8X8 626 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 RBAKDNA6NC62 111 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 FAM24AA6NFZ4 105 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF860A6NHJ4 632 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 C19orf84I3L1E1 186 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 COX7A2LO14548 114 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 IGLV2-11P01706 119 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 COX6A1P12074 109 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF138P52744 262 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 SYNJ2BPP57105 145 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 TAS2R19P59542 299 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 CDK5R1Q15078 307 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 MPV17L2Q567V2 206 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 MUC21Q5SSG8 566 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 CXCL17Q6UXB2 119 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 MDP1Q86V88 176 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 ZNF843Q8N446 348 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 H1FXQ92522 213 aaKnown RBP2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 FAM3DQ96BQ1 224 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 RBMXL1Q96E39 390 aaKnown RBP2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 LINC00479Q96M42 142 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 HDHD3Q9BSH5 251 aaPredicted RBP2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 UPK3BQ9BT76 320 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 CHAC1Q9BUX1 264 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 DPH3P1Q9H4G8 78 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 SLC25A22Q9H936 323 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms