RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 S100A7P31151 101 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 PPT1P50897 306 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 FAM90A2PQ658T7 463 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 RPP25LQ8N5L8 163 aaKnown RBP6.14□□□□□ -1.43
HDAC6-221ENST00000477561 EIF4E3Q8N5X7 224 aaKnown RBP6.14□□□□□ -1.43
HDAC6-221ENST00000477561 Q8WTZ3 238 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 GATAD1Q8WUU5 269 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 METTL26Q96S19 204 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 MRPL32Q9BYC8 188 aaKnown RBP6.14□□□□□ -1.43
HDAC6-221ENST00000477561 MAP1LC3BQ9GZQ8 125 aa6.14□□□□□ -1.43
HDAC6-221ENST00000477561 DNASE2O00115 360 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-221ENST00000477561 HYPMO75409 117 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 TOMM40O96008 361 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 RD3LP0DJH9 198 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 S100A1P23297 94 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 BMI1P35226 326 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 TAGLN2P37802 199 aaKnown RBP6.13□□□□□ -1.43
HDAC6-221ENST00000477561 TAS2R45P59539 299 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 PLP1P60201 277 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 YPEL3P61236 119 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-221ENST00000477561 PAFAH1B2P68402 229 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 ZNF90Q03938 601 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 PEA15Q15121 130 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 CASC10Q5T4H9 136 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 C10orf113Q5VZT2 155 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 FAM24BQ8N5W8 94 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 RAB24Q969Q5 203 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 MS4A6AQ9H2W1 248 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 SMDT1Q9H4I9 107 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 SLC25A22Q9H936 323 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 DNAJC4Q9NNZ3 241 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 RABAC1Q9UI14 185 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 RNF24Q9Y225 148 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 FUT9Q9Y231 359 aa6.13□□□□□ -1.43
HDAC6-221ENST00000477561 DYNC2H1Q8NCM8 4307 aaKnown RBP6.13□□□□□ -1.43
HDAC6-221ENST00000477561 A0A1B0GV50 99 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 A0A1W2PS18 150 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 CXorf1O96002 111 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 IL4P05112 153 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 OR5G3P0C626 314 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 PSG1P11464 419 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 GATA2P23769 480 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-221ENST00000477561 CRYBB3P26998 211 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 PSMB3P49720 205 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 PMS2P11Q13670 270 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 USF2Q15853 346 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-221ENST00000477561 ZNF726P1Q15940 193 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 GCSAMLQ5JQS6 135 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 FAM78BQ5VT40 261 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 LEMD1Q68G75 181 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 STXBP6Q8NFX7 210 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 OR51G1Q8NGK1 321 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 OR1B1Q8NGR6 318 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 FAM210AQ96ND0 272 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 OVOL2Q9BRP0 275 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 TMEM231Q9H6L2 316 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 MAP6D1Q9H9H5 199 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 SACSQ9NZJ4 4579 aa6.12□□□□□ -1.43
HDAC6-221ENST00000477561 STARD9Q9P2P6 4700 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 CD5P06127 495 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 STAG3L2P0CL84 134 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 STAG3L3P0CL85 134 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 ORM2P19652 201 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 APOC4P55056 127 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 DEFB131AP59861 70 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 LYZP61626 148 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 GUK1Q16774 197 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 DEFB135Q30KP9 77 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 SSX7Q7RTT5 188 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 IQCF2Q8IXL9 164 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 TMEM37Q8WXS4 190 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 GRAMD2BQ96HH9 432 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 NARS2Q96I59 477 aaKnown RBP6.11□□□□□ -1.43
HDAC6-221ENST00000477561 EIF5A2Q9GZV4 153 aaKnown RBP6.11□□□□□ -1.43
HDAC6-221ENST00000477561 TREM1Q9NP99 234 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 MANBALQ9NQG1 85 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 DOK5Q9P104 306 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 HIGD1AQ9Y241 93 aa6.11□□□□□ -1.43
HDAC6-221ENST00000477561 RBFOX3A6NFN3 312 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 KRBOX1C9JBD0 128 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 HMGB3O15347 200 aaKnown RBP6.1□□□□□ -1.43
HDAC6-221ENST00000477561 SPRY2O43597 315 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 BCL2P10415 239 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 FGF8P55075 233 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-221ENST00000477561 CMC4P56277 68 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-221ENST00000477561 CCL20P78556 96 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 TOR2AQ5JU69 321 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 ZNF506Q5JVG8 444 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 C16orf54Q6UWD8 224 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 MIR17HGQ75NE6 70 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 LINC00305Q7Z4B0 112 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 RNF125Q96EQ8 232 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 TXNDC17Q9BRA2 123 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 SEPSECSQ9HD40 501 aaKnown RBP6.1□□□□□ -1.43
HDAC6-221ENST00000477561 TMEM167BQ9NRX6 74 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 GNG13Q9P2W3 67 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 U3KQE9 123 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms