RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 ZNF586Q9NXT0 402 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 OR4C46A6NHA9 309 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 H3BTX0 84 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 K7EQG2 157 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 NBEAP1P0C6P0 100 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 IQCF2Q8IXL9 164 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 DCANP1Q8TF63 244 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 BLNKQ8WV28 456 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 UBQLN2Q9UHD9 624 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 MGAM2Q2M2H8 2515 aa12.13□□□□□ -0.47
VHL-203ENST00000477538 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 A0A1B0GV50 99 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 SOCS3O14543 225 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 EGFEM1PQ0D2K5 195 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 SAMD13Q5VXD3 122 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 LRRC20Q8TCA0 184 aa12.12□□□□□ -0.47
VHL-203ENST00000477538 ZNF256Q9Y2P7 627 aaPredicted RBP12.12□□□□□ -0.47
VHL-203ENST00000477538 SLC17A3O00476 420 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 ZNF253O75346 499 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 HBE1P02100 147 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 IFITM2Q01629 132 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 PDE6HQ13956 83 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 BEAN1Q3B7T3 259 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 SAT2Q96F10 170 aaPredicted RBP12.11□□□□□ -0.47
VHL-203ENST00000477538 C16orf92Q96LL3 132 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 TMEM167BQ9NRX6 74 aa12.11□□□□□ -0.47
VHL-203ENST00000477538 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
VHL-203ENST00000477538 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 TEX46H3BTG2 121 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 ISLRO14498 428 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 NDUFB4O95168 129 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 PSMB3P49720 205 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 FAM24BQ8N5W8 94 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
VHL-203ENST00000477538 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
VHL-203ENST00000477538 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
VHL-203ENST00000477538 ID1P41134 155 aa12.09□□□□□ -0.47
VHL-203ENST00000477538 KRTAP10-11P60412 298 aa12.09□□□□□ -0.47
VHL-203ENST00000477538 SNRPD3P62318 126 aaKnown RBP12.09□□□□□ -0.47
VHL-203ENST00000477538 PSG9Q00887 426 aa12.09□□□□□ -0.47
VHL-203ENST00000477538 ZNF767PQ75MW2 155 aa12.09□□□□□ -0.47
VHL-203ENST00000477538 NOTCH1P46531 2555 aa12.09□□□□□ -0.47
VHL-203ENST00000477538 TRAV8-2A0A0B4J237 113 aa12.08□□□□□ -0.48
VHL-203ENST00000477538 CD7P09564 240 aa12.08□□□□□ -0.48
VHL-203ENST00000477538 IGFL4Q6B9Z1 124 aa12.08□□□□□ -0.48
VHL-203ENST00000477538 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 CD81P60033 236 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
VHL-203ENST00000477538 CCL20P78556 96 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 GTSCR1Q86UQ5 136 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 RNF182Q8N6D2 247 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 PCNPQ8WW12 178 aaKnown RBP12.07□□□□□ -0.48
VHL-203ENST00000477538 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 PRR25Q96S07 402 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 Q9H3A6 140 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 AAMDCQ9H7C9 122 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 MAP6D1Q9H9H5 199 aa12.07□□□□□ -0.48
VHL-203ENST00000477538 CMC4P56277 68 aaPredicted RBP12.06□□□□□ -0.48
VHL-203ENST00000477538 UBE2G2P60604 165 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 PSG3Q16557 428 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 KPRPQ5T749 579 aaPredicted RBP12.06□□□□□ -0.48
VHL-203ENST00000477538 LYPD1Q8N2G4 141 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 EXOC3-AS1Q8N2X6 119 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 CLEC5AQ9NY25 188 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
VHL-203ENST00000477538 A0A1W2PRE2 83 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 OR11H12B2RN74 326 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 NMBP08949 121 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 PPT1P50897 306 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 DEFB131AP59861 70 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 ICAM4Q14773 271 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 ZNF738Q8NE65 137 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 LYPD6BQ8NI32 183 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 FAM110AQ9BQ89 295 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 OTORQ9NRC9 128 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 GNG13Q9P2W3 67 aa12.05□□□□□ -0.48
VHL-203ENST00000477538 PGPA6NDG6 321 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 FAM74A7A6NL05 159 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 RAB14P61106 215 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 MANBALQ9NQG1 85 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
VHL-203ENST00000477538 ARL2-SNX15V9GYD0 113 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 DNHD1Q96M86 4753 aa12.04□□□□□ -0.48
VHL-203ENST00000477538 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
VHL-203ENST00000477538 M0R3E3 92 aa12.03□□□□□ -0.48
VHL-203ENST00000477538 PAGE4O60829 102 aa12.03□□□□□ -0.48
VHL-203ENST00000477538 IFNA1P01562 189 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms