RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 ZNF503Q96F45 646 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 UBR5O95071 2799 aaPredicted RBP3.53□□□□□ -1.84
RGPD5-209ENST00000477523 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.53□□□□□ -1.84
RGPD5-209ENST00000477523 ISLRO14498 428 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 S100A8P05109 93 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 FAM3BP58499 235 aaPredicted RBP3.53□□□□□ -1.84
RGPD5-209ENST00000477523 OR5I1Q13606 314 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 SAMD13Q5VXD3 122 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF343Q6P1L6 599 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF414Q96IQ9 312 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 NRN1Q9NPD7 142 aa3.53□□□□□ -1.84
RGPD5-209ENST00000477523 FSHBP01225 129 aa3.53□□□□□ -1.85
RGPD5-209ENST00000477523 PPIFP30405 207 aaKnown RBP3.53□□□□□ -1.85
RGPD5-209ENST00000477523 OR10J6PQ8NGY7 276 aa3.53□□□□□ -1.85
RGPD5-209ENST00000477523 TMEM242Q9NWH2 141 aa3.53□□□□□ -1.85
RGPD5-209ENST00000477523 PSG8Q9UQ74 426 aa3.53□□□□□ -1.85
RGPD5-209ENST00000477523 ZFP30Q9Y2G7 519 aa3.53□□□□□ -1.85
RGPD5-209ENST00000477523 A0A1W2PRX2 142 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 A8MWL6 223 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 S100A2P29034 98 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SYNJ2BPP57105 145 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 TM4SF20Q53R12 229 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 ZNF586Q9NXT0 402 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 ZNF580Q9UK33 172 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SPINK4O60575 86 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 KLHL30-AS1Q8NEE0 82 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 C2CD4CQ8TF44 421 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 UBE2E2Q96LR5 201 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SNRPD3P62318 126 aaKnown RBP3.52□□□□□ -1.85
RGPD5-209ENST00000477523 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SMUG1Q53HV7 270 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 Q86TA4 180 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 OSTCQ9NRP0 149 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 TGIF2-C20orf24A0A0A6YYL0 155 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 BUB3O43684 328 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 IGLV1-40P01703 118 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 HIST1H1AQ02539 215 aaPredicted RBP3.52□□□□□ -1.85
RGPD5-209ENST00000477523 FABP9Q0Z7S8 132 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 MRPL54Q6P161 138 aaKnown RBP3.52□□□□□ -1.85
RGPD5-209ENST00000477523 WDR73Q6P4I2 378 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 LINC00479Q96M42 142 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SLC17A3O00476 420 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 ZNF253O75346 499 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 IGFL4Q6B9Z1 124 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 EBLN2Q6P2I7 272 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 Q6ZS46 218 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 TCF24Q7RTU0 167 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SAV1Q9H4B6 383 aaPredicted RBP3.52□□□□□ -1.85
RGPD5-209ENST00000477523 ZNF702PQ9H963 129 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 SMPXQ9UHP9 88 aa3.52□□□□□ -1.85
RGPD5-209ENST00000477523 IGHV7-4-1A0A0J9YVY3 117 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 CHEK1O14757 476 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 ZFP82Q8N141 532 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 OR1N2Q8NGR9 330 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 NAT8BQ9UHF3 227 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 ARHGAP32A7KAX9 2087 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TRBV20OR9-2A0A075B6H5 130 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TRAV8-1A0A0A6YYK1 113 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 LINC01619G3V211 115 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 BRI3O95415 125 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 ORM1P02763 201 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 OR11H1Q8NG94 326 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TMSB15BA0A087X1C1 80 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 Q6ZSV7 163 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 RNASE7Q9H1E1 156 aaKnown RBP3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TMEM189A5PLL7 270 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 OVOL1O14753 267 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TCF21O43680 179 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 CDX1P47902 265 aaPredicted RBP3.51□□□□□ -1.85
RGPD5-209ENST00000477523 C1QL4Q86Z23 238 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 PRDM13Q9H4Q3 707 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 ZFAND3Q9H8U3 227 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 IL36BQ9NZH7 164 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TRAPPC1Q9Y5R8 145 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 FLNAP21333 2647 aaKnown RBP3.51□□□□□ -1.85
RGPD5-209ENST00000477523 COLCA2A8K830 154 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 GCGP01275 180 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TRBV12-3P01733 135 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 HOXD3P31249 432 aaPredicted RBP3.51□□□□□ -1.85
RGPD5-209ENST00000477523 HILS1P60008 231 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 C10orf99Q6UWK7 81 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 C17orf77Q96MU5 243 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 RPP21Q9H633 154 aaKnown RBP3.51□□□□□ -1.85
RGPD5-209ENST00000477523 TRBV24-1A0A075B6N3 115 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 DIRC3C9JPN6 131 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 J3KRW8 73 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 PF4P02776 101 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 MT-ND6P03923 174 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 S100A4P26447 101 aaKnown RBP3.51□□□□□ -1.85
RGPD5-209ENST00000477523 CAMPP49913 170 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 NDUFA6P56556 154 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 PSG3Q16557 428 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 SRD5A3Q9H8P0 318 aa3.51□□□□□ -1.85
RGPD5-209ENST00000477523 IGKV2-40A0A087WW87 121 aaPredicted RBP3.5□□□□□ -1.85
RGPD5-209ENST00000477523 LY6G6DO95868 133 aa3.5□□□□□ -1.85
RGPD5-209ENST00000477523 IGKV2D-40P01614 121 aaPredicted RBP3.5□□□□□ -1.85
RGPD5-209ENST00000477523 IGLC2P0DOY2 106 aa3.5□□□□□ -1.85
RGPD5-209ENST00000477523 PRB4P10163 310 aaPredicted RBP3.5□□□□□ -1.85
RGPD5-209ENST00000477523 LCN12Q6JVE5 192 aa3.5□□□□□ -1.85
RGPD5-209ENST00000477523 UNQ9165/PRO28630Q6UXU0 137 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms