RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 Q6ZS92 163 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 OVOL2Q9BRP0 275 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 E7EQL1 145 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 RPRMLQ8N4K4 120 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 DAZ1Q9NQZ3 744 aaKnown RBP15.1■□□□□ 0.01
VARS2-209ENST00000477288 GAGE12JA6NER3 117 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 GAGE1Q13065 139 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 GAGE4Q13068 117 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 GAGE5Q13069 117 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 XCL2Q9UBD3 114 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 NEUROG3Q9Y4Z2 214 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 LINC00205P59089 165 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 IGKV1D-17A0A075B6S4 117 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 TNFSF13O75888 250 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 HOXD3P31249 432 aaPredicted RBP15.09■□□□□ 0.01
VARS2-209ENST00000477288 LURAP1LQ8IV03 231 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 FAM110DQ8TAY7 271 aaPredicted RBP15.09■□□□□ 0.01
VARS2-209ENST00000477288 AMBPP02760 352 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 RBMY1FQ15415 496 aaKnown RBP15.09■□□□□ 0.01
VARS2-209ENST00000477288 GLRX5Q86SX6 157 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 J3QRE1 110 aa15.09■□□□□ 0.01
VARS2-209ENST00000477288 DLX4Q92988 240 aaPredicted RBP15.09■□□□□ 0.01
VARS2-209ENST00000477288 AMN1Q8IY45 258 aa15.08■□□□□ 0.01
VARS2-209ENST00000477288 LY6G5BQ8NDX9 201 aa15.08■□□□□ 0.01
VARS2-209ENST00000477288 DAD1P61803 113 aa15.08■□□□□ 0
VARS2-209ENST00000477288 CGB7P0DN87 165 aa15.08■□□□□ 0
VARS2-209ENST00000477288 RASL11AQ6T310 242 aa15.08■□□□□ 0
VARS2-209ENST00000477288 HIST3H2BBQ8N257 126 aa15.08■□□□□ 0
VARS2-209ENST00000477288 NYNRINQ9P2P1 1898 aaKnown RBP15.08■□□□□ 0
VARS2-209ENST00000477288 LINC00473A8K010 186 aa15.08■□□□□ 0
VARS2-209ENST00000477288 LIME1Q9H400 295 aa15.08■□□□□ 0
VARS2-209ENST00000477288 INTS1Q8N201 2190 aaKnown RBP15.08■□□□□ 0
VARS2-209ENST00000477288 NDUFS8O00217 210 aa15.08■□□□□ 0
VARS2-209ENST00000477288 FGF16O43320 207 aa15.08■□□□□ 0
VARS2-209ENST00000477288 C5orf63A6NC05 138 aa15.07■□□□□ 0
VARS2-209ENST00000477288 IGKV1-5P01602 117 aa15.07■□□□□ 0
VARS2-209ENST00000477288 LINC01551Q86U37 167 aa15.07■□□□□ 0
VARS2-209ENST00000477288 NTF4P34130 210 aa15.07■□□□□ 0
VARS2-209ENST00000477288 MPZP25189 248 aa15.07■□□□□ 0
VARS2-209ENST00000477288 AKAP6Q13023 2319 aa15.07■□□□□ 0
VARS2-209ENST00000477288 UBE2CO00762 179 aa15.07■□□□□ 0
VARS2-209ENST00000477288 NKAPP1Q8N9T2 125 aa15.07■□□□□ 0
VARS2-209ENST00000477288 LINC01619G3V211 115 aa15.06■□□□□ 0
VARS2-209ENST00000477288 C17orf82Q86X59 251 aaPredicted RBP15.06■□□□□ 0
VARS2-209ENST00000477288 PMVKQ15126 192 aa15.06■□□□□ 0
VARS2-209ENST00000477288 CLPSP04118 112 aa15.06■□□□□ 0
VARS2-209ENST00000477288 PFN2P35080 140 aa15.06■□□□□ 0
VARS2-209ENST00000477288 MLANAQ16655 118 aa15.06■□□□□ 0
VARS2-209ENST00000477288 SUPT4H1P63272 117 aaKnown RBP15.05■□□□□ 0
VARS2-209ENST00000477288 KLK9Q9UKQ9 250 aa15.05■□□□□ 0
VARS2-209ENST00000477288 SPTBN1Q01082 2364 aaKnown RBP15.05■□□□□ 0
VARS2-209ENST00000477288 Q6P435 159 aa15.05■□□□□ 0
VARS2-209ENST00000477288 IL17RELQ6ZVW7 336 aa15.05■□□□□ 0
VARS2-209ENST00000477288 ZC2HC1BQ5TFG8 222 aa15.05■□□□□ -0
VARS2-209ENST00000477288 TMEM256Q8N2U0 113 aa15.05■□□□□ -0
VARS2-209ENST00000477288 PNRC2Q9NPJ4 139 aaKnown RBP15.05■□□□□ -0
VARS2-209ENST00000477288 DOCK4Q8N1I0 1966 aa15.05■□□□□ -0
VARS2-209ENST00000477288 C9JAW5 83 aa15.05■□□□□ -0
VARS2-209ENST00000477288 CACNA1DQ01668 2161 aa15.04■□□□□ -0
VARS2-209ENST00000477288 IGHG3P01860 377 aa15.04■□□□□ -0
VARS2-209ENST00000477288 KLHDC3Q9BQ90 382 aa15.04■□□□□ -0
VARS2-209ENST00000477288 RPP25LQ8N5L8 163 aaKnown RBP15.04■□□□□ -0
VARS2-209ENST00000477288 CACNA1GO43497 2377 aa15.04■□□□□ -0
VARS2-209ENST00000477288 ARMS2P0C7Q2 107 aa15.04■□□□□ -0
VARS2-209ENST00000477288 TRPT1Q86TN4 253 aaKnown RBP15.04■□□□□ -0
VARS2-209ENST00000477288 TMEM242Q9NWH2 141 aa15.04■□□□□ -0
VARS2-209ENST00000477288 K7ENP7 123 aa15.04■□□□□ -0
VARS2-209ENST00000477288 KIR3DS1Q14943 382 aa15.04■□□□□ -0
VARS2-209ENST00000477288 SPINK13Q1W4C9 94 aa15.04■□□□□ -0
VARS2-209ENST00000477288 TMEM190Q8WZ59 177 aa15.04■□□□□ -0
VARS2-209ENST00000477288 THADAQ6YHU6 1953 aa15.04■□□□□ -0
VARS2-209ENST00000477288 TRAV25A0A0B4J276 109 aa15.03■□□□□ -0
VARS2-209ENST00000477288 ATP6V0E1O15342 81 aa15.03■□□□□ -0
VARS2-209ENST00000477288 GATA3P23771 443 aa15.03■□□□□ -0
VARS2-209ENST00000477288 LHBP01229 141 aa15.03■□□□□ -0
VARS2-209ENST00000477288 GAS1P54826 345 aa15.03■□□□□ -0
VARS2-209ENST00000477288 TRBV24-1A0A075B6N3 115 aa15.03■□□□□ -0
VARS2-209ENST00000477288 B3GALT5-AS1P59052 145 aa15.03■□□□□ -0
VARS2-209ENST00000477288 RLFQ13129 1914 aa15.03■□□□□ -0
VARS2-209ENST00000477288 J3QKU1 62 aa15.03■□□□□ -0
VARS2-209ENST00000477288 SYS1-DBNDD2H3BUS1 97 aa15.02■□□□□ -0
VARS2-209ENST00000477288 C3orf79P0CE67 100 aa15.02■□□□□ -0
VARS2-209ENST00000477288 MPV17L2Q567V2 206 aa15.02■□□□□ -0
VARS2-209ENST00000477288 ZNRD1Q9P1U0 126 aa15.02□□□□□ -0.01
VARS2-209ENST00000477288 CHAC1Q9BUX1 264 aa15.02□□□□□ -0.01
VARS2-209ENST00000477288 GTSF1LQ9H1H1 148 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 TRBV25-1A0A075B6N4 114 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 TMEM14EPQ6UXP3 125 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 IGHV1-69DA0A0B4J2H0 117 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 NXPH4O95158 308 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 IGHV1-69P01742 117 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 UBE2E1P51965 193 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 Q86TA4 180 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 LHFPL1Q86WI0 220 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 LYPD1Q8N2G4 141 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 CYTL1Q9NRR1 136 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 TP53TG1Q9Y2A0 90 aa15.01□□□□□ -0.01
VARS2-209ENST00000477288 GAGE12BA1L429 117 aa15□□□□□ -0.01
VARS2-209ENST00000477288 GAGE7O76087 117 aa15□□□□□ -0.01
VARS2-209ENST00000477288 IGKV1-16P04430 117 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms