RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MGAMO43451 1857 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 E9PCH4 1651 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 NCAPD3P42695 1498 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 CAMSAP2Q08AD1 1489 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 SIP14410 1827 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 TRAV5A0A0B4J249 113 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 IGHV1-58A0A0C4DH39 117 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 M0R233 179 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 NUPR1O60356 82 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 RAB5CP51148 216 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 C2orf82Q6UX34 121 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 BORCS5Q969J3 196 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 ZNF714Q96N38 554 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 ORMDL1Q9P0S3 153 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 KDM6AO15550 1401 aaPredicted RBP1.46□□□□□ -2.18
VPS50-212ENST00000476413 RFX7Q2KHR2 1363 aa1.46□□□□□ -2.18
VPS50-212ENST00000476413 PTPRFP10586 1907 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 PPP5D1E7EU14 171 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 ERC2-IT1O76042 136 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 IDO1P14902 403 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 TMEM14EPQ6UXP3 125 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 MUCL1Q96DR8 90 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 ZC2HC1AQ96GY0 325 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 HYLS1Q96M11 299 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 NISCHQ9Y2I1 1504 aa1.45□□□□□ -2.18
VPS50-212ENST00000476413 YTHDC2Q9H6S0 1430 aaKnown RBP1.44□□□□□ -2.18
VPS50-212ENST00000476413 KLRD1Q13241 179 aa1.44□□□□□ -2.18
VPS50-212ENST00000476413 RTL8BQ17RB0 113 aa1.44□□□□□ -2.18
VPS50-212ENST00000476413 FAM24BQ8N5W8 94 aa1.44□□□□□ -2.18
VPS50-212ENST00000476413 CECR2Q9BXF3 1484 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 PEAK1Q9H792 1746 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 RER1O15258 196 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 HIST1H2BKO60814 126 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 DNAL4O96015 105 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 HIST1H2BJP06899 126 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 CXCL8P10145 99 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 HBBP68871 147 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 LINC00322Q6ZN03 302 aaPredicted RBP1.43□□□□□ -2.18
VPS50-212ENST00000476413 IFT20Q8IY31 132 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 PCBD2Q9H0N5 130 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 OTORQ9NRC9 128 aa1.43□□□□□ -2.18
VPS50-212ENST00000476413 COL1A1P02452 1464 aaPredicted RBP1.43□□□□□ -2.18
VPS50-212ENST00000476413 PIK3C2AO00443 1686 aa1.42□□□□□ -2.18
VPS50-212ENST00000476413 KLF7O75840 302 aaPredicted RBP1.42□□□□□ -2.18
VPS50-212ENST00000476413 TMEM78Q5T7P6 136 aa1.42□□□□□ -2.18
VPS50-212ENST00000476413 MYO18AQ92614 2054 aaKnown RBP1.41□□□□□ -2.18
VPS50-212ENST00000476413 CHD3Q12873 2000 aaKnown RBP1.41□□□□□ -2.18
VPS50-212ENST00000476413 TRAV27A0A087WT01 109 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 GPR31O00270 319 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 FABP1P07148 127 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 VBP1P61758 197 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 PSG9Q00887 426 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 DCUN1D2Q6PH85 259 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 PRR15Q8IV56 129 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 OR2H1Q9GZK4 316 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 MED11Q9P086 117 aa1.41□□□□□ -2.18
VPS50-212ENST00000476413 TECPR2O15040 1411 aa1.4□□□□□ -2.18
VPS50-212ENST00000476413 EML5Q05BV3 1969 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 PBRM1Q86U86 1689 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 MAP1LC3B2A6NCE7 125 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 OR2T8A6NH00 312 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 IFNA4P05014 189 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 NEFHP12036 1026 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 ARPINQ7Z6K5 226 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 DYDC1Q8WWB3 177 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 MAP1LC3BQ9GZQ8 125 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 TAF9BQ9HBM6 251 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 SMPXQ9UHP9 88 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 UNC13CQ8NB66 2214 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 LAMA4Q16363 1823 aa1.4□□□□□ -2.19
VPS50-212ENST00000476413 PHRF1Q9P1Y6 1649 aaKnown RBP1.4□□□□□ -2.19
VPS50-212ENST00000476413 hDV103S1A0JD37 113 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 F8W1H4 67 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 H7BYZ3 331 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 PRB3Q04118 309 aaPredicted RBP1.39□□□□□ -2.19
VPS50-212ENST00000476413 EIF3IQ13347 325 aaKnown RBP1.39□□□□□ -2.19
VPS50-212ENST00000476413 OR5AS1Q8N127 324 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 BORCS8Q96FH0 119 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 AMELYQ99218 206 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 LRTM1Q9HBL6 345 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 TMEM14CQ9P0S9 112 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 NUBP2Q9Y5Y2 271 aa1.39□□□□□ -2.19
VPS50-212ENST00000476413 ANKRD31Q8N7Z5 1873 aa1.38□□□□□ -2.19
VPS50-212ENST00000476413 CST7O76096 145 aa1.38□□□□□ -2.19
VPS50-212ENST00000476413 FREM3P0C091 2139 aa1.38□□□□□ -2.19
VPS50-212ENST00000476413 RPL35P42766 123 aaKnown RBP1.38□□□□□ -2.19
VPS50-212ENST00000476413 ZCCHC11Q5TAX3 1644 aaKnown RBP1.37□□□□□ -2.19
VPS50-212ENST00000476413 A0A1W2PRE2 83 aa1.37□□□□□ -2.19
VPS50-212ENST00000476413 COX7CP15954 63 aa1.37□□□□□ -2.19
VPS50-212ENST00000476413 LAMTOR3Q9UHA4 124 aa1.37□□□□□ -2.19
VPS50-212ENST00000476413 NUP210Q8TEM1 1887 aaPredicted RBP1.37□□□□□ -2.19
VPS50-212ENST00000476413 RTL9Q8NET4 1388 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 TRDV1A0A1B0GX56 115 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 C5orf67F2Z3F1 127 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 GKN2Q86XP6 184 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 LRRC18Q8N456 261 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 FAM216BQ8N7L0 139 aa1.36□□□□□ -2.19
VPS50-212ENST00000476413 C9orf170A2RU37 121 aa1.35□□□□□ -2.19
VPS50-212ENST00000476413 H3BQV1 296 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms