RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 Q6ZS92 163 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 BPIFA4PQ86YQ2 179 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 C8orf49Q96NF6 230 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 TMEM191AQ9H0A3 160 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 MEGF9Q9H1U4 602 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 DKK4Q9UBT3 224 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
CCDC39-204ENST00000476379 IGKV3D-20A0A0C4DH25 116 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 DLEU1O43261 78 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TNFSF13O75888 250 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 VENTXO95231 258 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 GPX1P07203 203 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 ERVK11-1P61568 191 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 HBBP68871 147 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 CLEC19AQ6UXS0 136 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 BCL6BQ8N143 479 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 FAM169BQ8N8A8 192 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 GAFA1Q96PS6 74 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TMEM70Q9BUB7 260 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 AP5S1Q9NUS5 200 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 BEX4Q9NWD9 120 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 SLC25A15Q9Y619 301 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 A0A0U1RRA0 63 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TMEM189A5PLL7 270 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 C15orf65H3BRN8 121 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 NDUFA3O95167 84 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 CRYABP02511 175 aaKnown RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 IGLL1P15814 213 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 SRSF2Q01130 221 aaKnown RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 C1orf194Q5T5A4 169 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 NEGR1Q7Z3B1 354 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 OR4B1Q8NGF8 309 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TIMD4Q96H15 378 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TMEM133Q9H2Q1 129 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TET2Q6N021 2002 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 C9JCJ5 164 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 YPEL1O60688 119 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 RNASE2P10153 161 aaKnown RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 GATA1P15976 413 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 RBPJQ06330 500 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 SLC25A34Q6PIV7 304 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 YPEL2Q96QA6 119 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 JMJD8Q96S16 334 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 TRAV1-1A0A0B4J248 108 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 GAGE10A6NGK3 116 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 D6R8Y8 96 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 SS18L1O75177 396 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 IFI27P40305 119 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 VDAC2P45880 294 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 PRCDQ00LT1 54 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 KLRB1Q12918 225 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 SCGB1D4Q6XE38 83 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 ZNF329Q86UD4 541 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 STXBP6Q8NFX7 210 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 OR4A5Q8NH83 315 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 ADTRPQ96IZ2 230 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 ALKBH7Q9BT30 221 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-204ENST00000476379 VCX2Q9H322 139 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 EPDR1Q9UM22 224 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 V9GYV3 84 aa4.01□□□□□ -1.77
CCDC39-204ENST00000476379 CPAMD8Q8IZJ3 1885 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 FAM181BA6NEQ2 426 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 CEACAM8P31997 349 aaPredicted RBP4□□□□□ -1.77
CCDC39-204ENST00000476379 BMI1P35226 326 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 PRRX1P54821 245 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 C8orf46Q8TAG6 207 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 ZNF257Q9Y2Q1 563 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 H0YJW9 148 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 KIR2DS2P43631 304 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 ADIPOQQ15848 244 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 GTSCR1Q86UQ5 136 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 PPP1R27Q86WC6 154 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 IGHV3-73A0A0B4J1V6 119 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 A0A1B0GV72 72 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 G3V318 75 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 K7EP13 123 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 FAM106CPP0CH98 169 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 PDLIM4P50479 330 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 KRTAP10-9P60411 292 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 NPC2P61916 151 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 FAM106AQ4KMX7 169 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 LINC00322Q6ZN03 302 aaPredicted RBP4□□□□□ -1.77
CCDC39-204ENST00000476379 RPP21Q9H633 154 aaKnown RBP4□□□□□ -1.77
CCDC39-204ENST00000476379 MSRB1Q9NZV6 116 aa4□□□□□ -1.77
CCDC39-204ENST00000476379 K7ERJ3 54 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 Q1RN00 199 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 DNLZQ5SXM8 178 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 EBLN2Q6P2I7 272 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 RNASE6Q93091 150 aaKnown RBP3.99□□□□□ -1.77
CCDC39-204ENST00000476379 GPR82Q96P67 336 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 FOXC2Q99958 501 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 C19orf24Q9BVV8 132 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 C11orf1Q9H5F2 150 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 CTSZQ9UBR2 303 aa3.99□□□□□ -1.77
CCDC39-204ENST00000476379 IZUMO1RA6ND01 250 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms