RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZMAT4Q9H898 229 aa5.43□□□□□ -1.54
UBR4-212ENST00000475973 OTORQ9NRC9 128 aa5.43□□□□□ -1.54
UBR4-212ENST00000475973 ZNRD1Q9P1U0 126 aa5.43□□□□□ -1.54
UBR4-212ENST00000475973 WASHC3Q9Y3C0 194 aa5.43□□□□□ -1.54
UBR4-212ENST00000475973 C2CD3Q4AC94 2353 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 NF1P21359 2839 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 IGHV2-70DA0A0C4DH43 119 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 LY6LH3BQJ8 138 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 CORTO00230 105 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 COX7A2P2O60397 106 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 LY6G6DO95868 133 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 CA1P00915 261 aaPredicted RBP5.42□□□□□ -1.54
UBR4-212ENST00000475973 IGLC1P0CG04 106 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 G0S2P27469 103 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 TCL1AP56279 114 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 UBE2G1P62253 170 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 HBBP68871 147 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 UBE2V1Q13404 147 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 LRRC10Q5BKY1 277 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 ZNF493Q6ZR52 646 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 RBPMS2Q6ZRY4 209 aaKnown RBP5.42□□□□□ -1.54
UBR4-212ENST00000475973 LINC00305Q7Z4B0 112 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 LYPD1Q8N2G4 141 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 CIARTQ8N365 385 aaPredicted RBP5.42□□□□□ -1.54
UBR4-212ENST00000475973 FAM19A2Q8N3H0 131 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 KIR3DL3Q8N743 410 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 IGFBPL1Q8WX77 278 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 MS4A6AQ9H2W1 248 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 C19orf73Q9NVV2 129 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 F11RQ9Y624 299 aaKnown RBP5.42□□□□□ -1.54
UBR4-212ENST00000475973 COX11Q9Y6N1 276 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 U3KQK5 164 aa5.42□□□□□ -1.54
UBR4-212ENST00000475973 YLPM1P49750 1951 aaKnown RBP5.42□□□□□ -1.54
UBR4-212ENST00000475973 PPIAL4EA0A075B759 164 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 LOC102724200A0A096LPH7 203 aaPredicted RBP5.41□□□□□ -1.54
UBR4-212ENST00000475973 A0A1B0GW15 77 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 LINC01546A6NGU7 62 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 PPIAL4DF5H284 164 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 SYS1-DBNDD2H3BUS1 97 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 I3L2K1 104 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 CCL25O15444 150 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 PPIAL4FP0DN26 164 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 IGHV1-8P0DP01 117 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 CCL3L1P16619 93 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 GNG10P50151 68 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 RBX1P62877 108 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 SLC35B1P78383 322 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 DIAPH2-AS1Q14236 149 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 SAPCD1Q5SSQ6 148 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 C10orf55Q5SWW7 151 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 LCN12Q6JVE5 192 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 DTX2Q86UW9 622 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 ZNF575Q86XF7 245 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 BORCS7Q96B45 105 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 RITA1Q96K30 269 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 ZNF48Q96MX3 618 aaPredicted RBP5.41□□□□□ -1.54
UBR4-212ENST00000475973 TMEM70Q9BUB7 260 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 SSBP3Q9BWW4 388 aaPredicted RBP5.41□□□□□ -1.54
UBR4-212ENST00000475973 HINT2Q9BX68 163 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 CTSZQ9UBR2 303 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 PPIAL4AQ9Y536 164 aa5.41□□□□□ -1.54
UBR4-212ENST00000475973 RAI1Q7Z5J4 1906 aaPredicted RBP5.4□□□□□ -1.54
UBR4-212ENST00000475973 LOC105371242A0A075B767 164 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 TRAV34A0A0B4J273 112 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 IGHV1-24A0A0C4DH33 117 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 PGPA6NDG6 321 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 SHISA9B4DS77 424 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 INAFM1C9JVW0 142 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 SPINK4O60575 86 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 HSBP1O75506 76 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 IGKV1-17P01599 117 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 MGST1P10620 155 aaKnown RBP5.4□□□□□ -1.54
UBR4-212ENST00000475973 TFPI2P48307 235 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 HNRNPA3P51991 378 aaKnown RBP5.4□□□□□ -1.54
UBR4-212ENST00000475973 DSCR9P59020 149 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 SRSF2Q01130 221 aaKnown RBP5.4□□□□□ -1.54
UBR4-212ENST00000475973 MAJINQ3KP22 176 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 VMA21Q3ZAQ7 101 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 CLEC2AQ6UVW9 174 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 Q6ZN92 141 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 Q86TA4 180 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 DEFB125Q8N687 156 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 TMEM75Q8N9X5 138 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 LY6G5BQ8NDX9 201 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 PIFOQ8TCI5 191 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 H1FXQ92522 213 aaKnown RBP5.4□□□□□ -1.54
UBR4-212ENST00000475973 FAM103A1Q9BTL3 118 aaKnown RBP5.4□□□□□ -1.54
UBR4-212ENST00000475973 SCRT2Q9NQ03 307 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 RNF24Q9Y225 148 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 SIGLEC9Q9Y336 463 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 CBY1Q9Y3M2 126 aa5.4□□□□□ -1.54
UBR4-212ENST00000475973 SPG11Q96JI7 2443 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 PRRC2AP48634 2157 aaKnown RBP5.39□□□□□ -1.55
UBR4-212ENST00000475973 CADP27708 2225 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 A0A096LNJ9 63 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 WI2-2373I1.2A0A1W2PRP0 233 aa5.39□□□□□ -1.55
UBR4-212ENST00000475973 H3BRN7 92 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms